| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609611
Identifier: 86609611
GI number: 86609611
Start: 2267646
End: 2268005
Strand: Direct
Name: 86609611
Synonym: CYB_2164
Alternate gene names: NA
Gene position: 2267646-2268005 (Clockwise)
Preceding gene: 86609608
Following gene: 86609612
Centisome position: 74.43
GC content: 58.33
Gene sequence:
>360_bases ATGGCATGGCAACAGGTTCAGGCGGGGGTGTGGTGTAGGCAGTTGGGGCAATTGGCGCCTCAGTGGTGGTTGGGCTGGAG TCTGGAGCAGGGCTTTCGGCTCTACCGCAAAGAAGTTTCCTCTGCTCTGCCTTCTCTCTCTGCTTTGAGGATTCGCTACC AAGAGCGAGATGGCTGGCTGGACGTGTTTCTGGGAGAAGCGGAGCAATGTAACCGACGACGGCGCAGCCTTTTGGATCCG GCAGCGCGGGTAGCCTTGCACTACATGCCGGAAGATTTAGCTCAGATTCAGTCCCTAAAGTGTCCTCACGAGCGCATTCC TCCGCAGCTTTGGCAGCGGCTAACCCAGCAGCCGGGTTGA
Upstream 100 bases:
>100_bases CATTAAGCTTGAGGAGTCTGGTAGAGTGCTTACCCAAGTAGCAATTGCTAAAGATTTGCAGTTAAGTCTTCTCAGGAGAA CAAGCTGCGGAGTGGCAAGC
Downstream 100 bases:
>100_bases GGACTGTTGAAGGTTAGAGGGCTATTTATTGTTATTGTTTCAGATGGATCCAGTCCGCTGCGGCAACCGATCCTGCCTCT TCTCGCCTTTCCAGTTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAWQQVQAGVWCRQLGQLAPQWWLGWSLEQGFRLYRKEVSSALPSLSALRIRYQERDGWLDVFLGEAEQCNRRRRSLLDP AARVALHYMPEDLAQIQSLKCPHERIPPQLWQRLTQQPG
Sequences:
>Translated_119_residues MAWQQVQAGVWCRQLGQLAPQWWLGWSLEQGFRLYRKEVSSALPSLSALRIRYQERDGWLDVFLGEAEQCNRRRRSLLDP AARVALHYMPEDLAQIQSLKCPHERIPPQLWQRLTQQPG >Mature_118_residues AWQQVQAGVWCRQLGQLAPQWWLGWSLEQGFRLYRKEVSSALPSLSALRIRYQERDGWLDVFLGEAEQCNRRRRSLLDPA ARVALHYMPEDLAQIQSLKCPHERIPPQLWQRLTQQPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13995; Mature: 13864
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWQQVQAGVWCRQLGQLAPQWWLGWSLEQGFRLYRKEVSSALPSLSALRIRYQERDGWL CCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCH DVFLGEAEQCNRRRRSLLDPAARVALHYMPEDLAQIQSLKCPHERIPPQLWQRLTQQPG HHHCCCHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure AWQQVQAGVWCRQLGQLAPQWWLGWSLEQGFRLYRKEVSSALPSLSALRIRYQERDGWL CHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCH DVFLGEAEQCNRRRRSLLDPAARVALHYMPEDLAQIQSLKCPHERIPPQLWQRLTQQPG HHHCCCHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA