| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is eriC [C]
Identifier: 86609597
GI number: 86609597
Start: 2250657
End: 2252528
Strand: Direct
Name: eriC [C]
Synonym: CYB_2150
Alternate gene names: 86609597
Gene position: 2250657-2252528 (Clockwise)
Preceding gene: 86609596
Following gene: 86609602
Centisome position: 73.87
GC content: 62.77
Gene sequence:
>1872_bases ATGAACAGCGCCCCCGCTCTCCGCCTGCGCCTCTCCTCCGAGAACCTGCTGCTGCTGCTGGCGGCGGCAGTGGGGTTGGC CACGGGGCTGTTGGTGGTTGGATTTCGCTACTTGATTGGCTGGTGGCGCTATCTGCTGCAGGACACCCTCGTGGATGGCA TCGGCAGGGCTGCAGAACACTATGGCCTGTGGCTGCTGGGATCCTGGACACTGGCTCTGGCGCCGGTGCTGGGGGGCCTG CTGATCGGCGCTTTGGGGGCAGTTGTGCCCTTTCCCAACTTGAGCCTCTCCAGCTTGGTGAGTCCTGCTCGTCCTTTGGC ACTTCAGCCCTGGTGGATCCCGCTCAAGCTCTTGGCGGCTGCCATCTCGTTGGGCGCGGGAGCTTCCCTTGGCCCTGAGG CCCCCAGTGTGGAAAGTGGCGCTTTGCTGGGATCCCTGCTGGGGCAAAACCTACGCCTCTCGCGGGAGCGGGTGCAACTG TTGATGGCTGCCGGAGCAGCGGCTGGCCTGGCGGCAGGGTTTAACGCGCCCATTGCCGGGGTGTTTTTGGCGCTGGAGCT GGCTTTGGCCCGCACCTTCACCACTTCTGCTGTCAGTGTGGTGGTGTTGGCGGCGGTGGTCTCCGCCTTGATCGCCCAGG TGGGGTTGGGGGCACAACCCGCTTTTCTTTTGCCCACCATCACCCAGCCGGCTTTTGTCTTGCCGGACTACGAGATCCAC AGCTTGCTGGAGGTACCTCTGTATCTCGGCTTGGGCTTTTTGGCCAGCCTGGTTTCTATGGCCTTCAGCTACACCCTGGA GTGGGGCAAGCACCTGTTCAACAGTGGCCCCCTGGCGGCCTGGCCAGCTTGGAGCAAGCCCATTTTGGGGGGCGGGATCC TGGGCTGCGCGGGCTTGGGGATCCCATTGGCGTTGGGGGTGGGCTATGAAACCATTGAGTCGATTCTGCAGGCCGTTCCC TTTTCTCTTGGCCATCTGGGCCTGCTCCTATTGGGCAAGCTGTTGCTGAGCGCTTTGAGCCTGGGCAGCGGCTTTGTGGG GGGAACCTTTGCCCCGGCTTTGTTCATGGGGGCAGTGCTGGGGGCAGGCTACGGTCAGGTGCTATCCCAAGCTTTGCCCC TGATTGCCTTGTCTCCCCCCGCTGCCTACGCCATGGTGGGCATGGCGGCTGTGTTGGCGGCCAGTGTGCGGGCTCCGCTA ACGGCCATCTTGCTGCTGTTTGAGATGACGCGGGACTATCACATTGCGCTGCCGGTGATGGCGGCAGTGGGTTTGAGCAT CTGGCTGACGGAGCAGTTGCATTCGCCGGCCATCTACCCTTCCGCCCGTCGCTATCGCCACGCAACGCTTGACGGAGTCC TTGGGCAGGAGCCTAGAGAGCTGACGGTGCAAGAGGTGATGGTGCCCCCATCTCTTTTGCTTCGGCAAGACACACCGCTG CGAGAAGCTCTGGAGAGTTTGCTGCAGCAAAAGTGCCATAGCGCGTTGGTGGTGGACGGACAGGAGCGGCTGCGGGGCAT TCTCACCCTGGAAGACCTGGAGCGGGCCTTGGCCCACAAGGAGGCGGCGGAGTTGGCGGAGCTAACCGTACAGGAGGTCA GCCAATCCCCAGTTCTCACCACCTTCCCCGATGAGGCGGTGGCAGTGGCAGCCGAGCCGATGTACGAATACGATTTGCGC CAATTGCCGGTGGTTTCTCGGGAAGACCCAGAGCAGATCGTCGGCCTGTTGGATCGAGAGCGGGTGCTGCTCTCCCAAGA GATTCAATCGGTGCGGCAAGCCCTGGAGTTGGAAGTTCCCCCAGCAGAGAGAGACGCCGGCAGGAACGGACAAGAGGGGA TCCCCGATGCTTCTACTGCGCCCGCAGAATAG
Upstream 100 bases:
>100_bases TTTAGATGGCAAGCTCTCGGCGCAATTTGAACATACAGTCGCCGTTACCGAAACCGGTGTAGAAATTTTAACCCTGCCTT CCCAAAGCCCTTGAGCCATC
Downstream 100 bases:
>100_bases AGCCCTGCTGTCGGGATCAGCGCTGCCGCCCAGAAGGGCAGGTGGGACGCAGCGGGCAGCGGCCACATTCGGGCATACGG GCCTTGCAGATGCGCTTGCC
Product: chloride channel (ClC) family protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MNSAPALRLRLSSENLLLLLAAAVGLATGLLVVGFRYLIGWWRYLLQDTLVDGIGRAAEHYGLWLLGSWTLALAPVLGGL LIGALGAVVPFPNLSLSSLVSPARPLALQPWWIPLKLLAAAISLGAGASLGPEAPSVESGALLGSLLGQNLRLSRERVQL LMAAGAAAGLAAGFNAPIAGVFLALELALARTFTTSAVSVVVLAAVVSALIAQVGLGAQPAFLLPTITQPAFVLPDYEIH SLLEVPLYLGLGFLASLVSMAFSYTLEWGKHLFNSGPLAAWPAWSKPILGGGILGCAGLGIPLALGVGYETIESILQAVP FSLGHLGLLLLGKLLLSALSLGSGFVGGTFAPALFMGAVLGAGYGQVLSQALPLIALSPPAAYAMVGMAAVLAASVRAPL TAILLLFEMTRDYHIALPVMAAVGLSIWLTEQLHSPAIYPSARRYRHATLDGVLGQEPRELTVQEVMVPPSLLLRQDTPL REALESLLQQKCHSALVVDGQERLRGILTLEDLERALAHKEAAELAELTVQEVSQSPVLTTFPDEAVAVAAEPMYEYDLR QLPVVSREDPEQIVGLLDRERVLLSQEIQSVRQALELEVPPAERDAGRNGQEGIPDASTAPAE
Sequences:
>Translated_623_residues MNSAPALRLRLSSENLLLLLAAAVGLATGLLVVGFRYLIGWWRYLLQDTLVDGIGRAAEHYGLWLLGSWTLALAPVLGGL LIGALGAVVPFPNLSLSSLVSPARPLALQPWWIPLKLLAAAISLGAGASLGPEAPSVESGALLGSLLGQNLRLSRERVQL LMAAGAAAGLAAGFNAPIAGVFLALELALARTFTTSAVSVVVLAAVVSALIAQVGLGAQPAFLLPTITQPAFVLPDYEIH SLLEVPLYLGLGFLASLVSMAFSYTLEWGKHLFNSGPLAAWPAWSKPILGGGILGCAGLGIPLALGVGYETIESILQAVP FSLGHLGLLLLGKLLLSALSLGSGFVGGTFAPALFMGAVLGAGYGQVLSQALPLIALSPPAAYAMVGMAAVLAASVRAPL TAILLLFEMTRDYHIALPVMAAVGLSIWLTEQLHSPAIYPSARRYRHATLDGVLGQEPRELTVQEVMVPPSLLLRQDTPL REALESLLQQKCHSALVVDGQERLRGILTLEDLERALAHKEAAELAELTVQEVSQSPVLTTFPDEAVAVAAEPMYEYDLR QLPVVSREDPEQIVGLLDRERVLLSQEIQSVRQALELEVPPAERDAGRNGQEGIPDASTAPAE >Mature_623_residues MNSAPALRLRLSSENLLLLLAAAVGLATGLLVVGFRYLIGWWRYLLQDTLVDGIGRAAEHYGLWLLGSWTLALAPVLGGL LIGALGAVVPFPNLSLSSLVSPARPLALQPWWIPLKLLAAAISLGAGASLGPEAPSVESGALLGSLLGQNLRLSRERVQL LMAAGAAAGLAAGFNAPIAGVFLALELALARTFTTSAVSVVVLAAVVSALIAQVGLGAQPAFLLPTITQPAFVLPDYEIH SLLEVPLYLGLGFLASLVSMAFSYTLEWGKHLFNSGPLAAWPAWSKPILGGGILGCAGLGIPLALGVGYETIESILQAVP FSLGHLGLLLLGKLLLSALSLGSGFVGGTFAPALFMGAVLGAGYGQVLSQALPLIALSPPAAYAMVGMAAVLAASVRAPL TAILLLFEMTRDYHIALPVMAAVGLSIWLTEQLHSPAIYPSARRYRHATLDGVLGQEPRELTVQEVMVPPSLLLRQDTPL REALESLLQQKCHSALVVDGQERLRGILTLEDLERALAHKEAAELAELTVQEVSQSPVLTTFPDEAVAVAAEPMYEYDLR QLPVVSREDPEQIVGLLDRERVLLSQEIQSVRQALELEVPPAERDAGRNGQEGIPDASTAPAE
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=430, Percent_Identity=30.9302325581395, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87081943, Length=325, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 65527; Mature: 65527
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSAPALRLRLSSENLLLLLAAAVGLATGLLVVGFRYLIGWWRYLLQDTLVDGIGRAAEH CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLWLLGSWTLALAPVLGGLLIGALGAVVPFPNLSLSSLVSPARPLALQPWWIPLKLLAA CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH AISLGAGASLGPEAPSVESGALLGSLLGQNLRLSRERVQLLMAAGAAAGLAAGFNAPIAG HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VFLALELALARTFTTSAVSVVVLAAVVSALIAQVGLGAQPAFLLPTITQPAFVLPDYEIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEECCCHHHH SLLEVPLYLGLGFLASLVSMAFSYTLEWGKHLFNSGPLAAWPAWSKPILGGGILGCAGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCC IPLALGVGYETIESILQAVPFSLGHLGLLLLGKLLLSALSLGSGFVGGTFAPALFMGAVL HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GAGYGQVLSQALPLIALSPPAAYAMVGMAAVLAASVRAPLTAILLLFEMTRDYHIALPVM HCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAVGLSIWLTEQLHSPAIYPSARRYRHATLDGVLGQEPRELTVQEVMVPPSLLLRQDTPL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCCH REALESLLQQKCHSALVVDGQERLRGILTLEDLERALAHKEAAELAELTVQEVSQSPVLT HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TFPDEAVAVAAEPMYEYDLRQLPVVSREDPEQIVGLLDRERVLLSQEIQSVRQALELEVP ECCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAERDAGRNGQEGIPDASTAPAE CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSAPALRLRLSSENLLLLLAAAVGLATGLLVVGFRYLIGWWRYLLQDTLVDGIGRAAEH CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLWLLGSWTLALAPVLGGLLIGALGAVVPFPNLSLSSLVSPARPLALQPWWIPLKLLAA CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH AISLGAGASLGPEAPSVESGALLGSLLGQNLRLSRERVQLLMAAGAAAGLAAGFNAPIAG HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VFLALELALARTFTTSAVSVVVLAAVVSALIAQVGLGAQPAFLLPTITQPAFVLPDYEIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEECCCHHHH SLLEVPLYLGLGFLASLVSMAFSYTLEWGKHLFNSGPLAAWPAWSKPILGGGILGCAGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCC IPLALGVGYETIESILQAVPFSLGHLGLLLLGKLLLSALSLGSGFVGGTFAPALFMGAVL HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GAGYGQVLSQALPLIALSPPAAYAMVGMAAVLAASVRAPLTAILLLFEMTRDYHIALPVM HCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAVGLSIWLTEQLHSPAIYPSARRYRHATLDGVLGQEPRELTVQEVMVPPSLLLRQDTPL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCCH REALESLLQQKCHSALVVDGQERLRGILTLEDLERALAHKEAAELAELTVQEVSQSPVLT HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TFPDEAVAVAAEPMYEYDLRQLPVVSREDPEQIVGLLDRERVLLSQEIQSVRQALELEVP ECCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAERDAGRNGQEGIPDASTAPAE CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]