| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609602
Identifier: 86609602
GI number: 86609602
Start: 2256065
End: 2256475
Strand: Direct
Name: 86609602
Synonym: CYB_2155
Alternate gene names: NA
Gene position: 2256065-2256475 (Clockwise)
Preceding gene: 86609597
Following gene: 86609604
Centisome position: 74.05
GC content: 55.47
Gene sequence:
>411_bases ATGACCACGCCCCCTCGCCGACCGGCCCTCAATCACGTGCTCATCGTCAAGGATCGTCACGGGCCAAAAGCCTACTGGTT GACGGCTGAGCTTTATTCGTTGGGCCGGGATCCGCGCAACAGCATTCGCATCGACTCCCAGTACGCCTCTCGCTACCACG CCATTTTGGTTAAGACAGAGTCTCCCTCTTCTCCCGATGGGTTTACCTACCAAATCATTGACGGAGACATTCAGGGCACT CCCAGCACCAACGGCCTTTACGTGGGCGGGCAACGGGTGGAATTTCGGGATCTGGAGGACGGGGACGAAATTCAGTTTGG CAACGATGCCACCGCTACCTACTCGCTGCAGAACAAAGATCTGGATGAAATTCTGGCTACCTTTGAAAACACCCAGATCG TTGAGCTCTGA
Upstream 100 bases:
>100_bases CCTGAAGAGACTTATCCGGTGGACACAGGGATCCACCAGGGGGATCCTATGTTATGTTTTGGCTATCTTGCCCTCAGTGT TGTGCAAGCGGGTGCCTTTC
Downstream 100 bases:
>100_bases GAGGCTGCTTTCCCTGTTGAGTTTTGGCCTGTGGGGGATCCCCCTGTCCCCACGTGGGTTGAGGGGTTAACCGGCGCTCG GAGAAGGGATCCCGTCGCCG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; FHA Domain Containing Protein; Two-Component Sensor Histidine Kinase; FHA Domain Protein; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase; GAF Sensor Signal Transduction Histidine Kinase; Vault Protein Inter-Alpha-Trypsin; Diguanylate Phosphodiesterase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTTPPRRPALNHVLIVKDRHGPKAYWLTAELYSLGRDPRNSIRIDSQYASRYHAILVKTESPSSPDGFTYQIIDGDIQGT PSTNGLYVGGQRVEFRDLEDGDEIQFGNDATATYSLQNKDLDEILATFENTQIVEL
Sequences:
>Translated_136_residues MTTPPRRPALNHVLIVKDRHGPKAYWLTAELYSLGRDPRNSIRIDSQYASRYHAILVKTESPSSPDGFTYQIIDGDIQGT PSTNGLYVGGQRVEFRDLEDGDEIQFGNDATATYSLQNKDLDEILATFENTQIVEL >Mature_135_residues TTPPRRPALNHVLIVKDRHGPKAYWLTAELYSLGRDPRNSIRIDSQYASRYHAILVKTESPSSPDGFTYQIIDGDIQGTP STNGLYVGGQRVEFRDLEDGDEIQFGNDATATYSLQNKDLDEILATFENTQIVEL
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15288; Mature: 15157
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPRRPALNHVLIVKDRHGPKAYWLTAELYSLGRDPRNSIRIDSQYASRYHAILVKTE CCCCCCCCCCCEEEEEEECCCCEEEEEEEEHHHCCCCCCCCEEECHHHCCCEEEEEEEEC SPSSPDGFTYQIIDGDIQGTPSTNGLYVGGQRVEFRDLEDGDEIQFGNDATATYSLQNKD CCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCCEEEEEECCCC LDEILATFENTQIVEL HHHHHHHCCCEEEEEC >Mature Secondary Structure TTPPRRPALNHVLIVKDRHGPKAYWLTAELYSLGRDPRNSIRIDSQYASRYHAILVKTE CCCCCCCCCCEEEEEEECCCCEEEEEEEEHHHCCCCCCCCEEECHHHCCCEEEEEEEEC SPSSPDGFTYQIIDGDIQGTPSTNGLYVGGQRVEFRDLEDGDEIQFGNDATATYSLQNKD CCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCCEEEEEECCCC LDEILATFENTQIVEL HHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA