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The map label for this gene is yacP [H]

Identifier: 86609568

GI number: 86609568

Start: 2214227

End: 2214769

Strand: Reverse

Name: yacP [H]

Synonym: CYB_2120

Alternate gene names: 86609568

Gene position: 2214769-2214227 (Counterclockwise)

Preceding gene: 86609569

Following gene: 86609565

Centisome position: 72.69

GC content: 59.12

Gene sequence:

>543_bases
ATGCAAGCTTCCTCTTCCACCTTCCTCTTGGTTGATGGCTACAACATCATCGGAGCTTGGCCCACCCTGAACCAGTTGGC
GCGTCGCTCCCTGATGGAATTGGCCCGTCTGCGCTTGGTGGAATCTTTGGCCAACTATGTGGCCTTCCGGGGCTACCAGG
CGACCGTGGTGTACGATGCCTACGCCCAACCCACTCCAGCCCGGCAAGAGCGCTCCCCTTCGGGTATCGAGATCCTGTAT
ACCTCCTATGGCGAGACCGCCGACAGTTGCATTGAACGGCTGTGTGCTCAGCTGCAGAAGGATGGGTGTCGGGTAAGGGT
GGCTACCTCCGATCGTGTCCAGCAATTGGTGATCGGTGGCTACAACGCCGAATGGGTCTCGGCAGAACAACTGTGGGATG
AAGTGCAGCAGGCCCAGCAGCAGATCCGGCACCTCCAGCCAAAACGGCTATCGAGCAAGCGGGGCATTGATGCCTACTTG
GATGCAGAAACCCTCTCACGCCTAAACCGCTGGCGGCTGTCCGGCCAAGATCCCATGCGCTAA

Upstream 100 bases:

>100_bases
GAGTAGTGGGGTAACCTTTAAGGCTGGGTACTAAGATTAAAAATAAGATAAAGATTAAGATTAAGAAGTGTGATCCCGGA
CAGGGGATCCACCGTCATCC

Downstream 100 bases:

>100_bases
ATGCCATCGTAGGGAACGGTGGGAGCTCCATACCAAAGATGCTCTTCATCTGGCGAGGCAGTGGGCAACTGCTCCTGTGA
AGGATCCGCCGGAGCCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MQASSSTFLLVDGYNIIGAWPTLNQLARRSLMELARLRLVESLANYVAFRGYQATVVYDAYAQPTPARQERSPSGIEILY
TSYGETADSCIERLCAQLQKDGCRVRVATSDRVQQLVIGGYNAEWVSAEQLWDEVQQAQQQIRHLQPKRLSSKRGIDAYL
DAETLSRLNRWRLSGQDPMR

Sequences:

>Translated_180_residues
MQASSSTFLLVDGYNIIGAWPTLNQLARRSLMELARLRLVESLANYVAFRGYQATVVYDAYAQPTPARQERSPSGIEILY
TSYGETADSCIERLCAQLQKDGCRVRVATSDRVQQLVIGGYNAEWVSAEQLWDEVQQAQQQIRHLQPKRLSSKRGIDAYL
DAETLSRLNRWRLSGQDPMR
>Mature_180_residues
MQASSSTFLLVDGYNIIGAWPTLNQLARRSLMELARLRLVESLANYVAFRGYQATVVYDAYAQPTPARQERSPSGIEILY
TSYGETADSCIERLCAQLQKDGCRVRVATSDRVQQLVIGGYNAEWVSAEQLWDEVQQAQQQIRHLQPKRLSSKRGIDAYL
DAETLSRLNRWRLSGQDPMR

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20444; Mature: 20444

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASSSTFLLVDGYNIIGAWPTLNQLARRSLMELARLRLVESLANYVAFRGYQATVVYDA
CCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
YAQPTPARQERSPSGIEILYTSYGETADSCIERLCAQLQKDGCRVRVATSDRVQQLVIGG
CCCCCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCC
YNAEWVSAEQLWDEVQQAQQQIRHLQPKRLSSKRGIDAYLDAETLSRLNRWRLSGQDPMR
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHEECHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQASSSTFLLVDGYNIIGAWPTLNQLARRSLMELARLRLVESLANYVAFRGYQATVVYDA
CCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
YAQPTPARQERSPSGIEILYTSYGETADSCIERLCAQLQKDGCRVRVATSDRVQQLVIGG
CCCCCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCC
YNAEWVSAEQLWDEVQQAQQQIRHLQPKRLSSKRGIDAYLDAETLSRLNRWRLSGQDPMR
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHEECHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]