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The map label for this gene is 86609565

Identifier: 86609565

GI number: 86609565

Start: 2212141

End: 2212764

Strand: Reverse

Name: 86609565

Synonym: CYB_2118

Alternate gene names: NA

Gene position: 2212764-2212141 (Counterclockwise)

Preceding gene: 86609568

Following gene: 86609564

Centisome position: 72.63

GC content: 56.73

Gene sequence:

>624_bases
ATGTGGGCCGGTTTTTTATCGAGTTTGCTGCTGGTGACGGTAGCGGAATTTGGGGACAAAACCTTTTTTACCCCCTTGAT
TTTGGCGATGCGCCACCCACGCCGCTGGGTTTTTCTGGGGACATGGCTGGCTTTAGCGATGATGAACCTGCTAGCGGTAG
GAACCGGGCAAGTGCTTTTTAAGCTACTGCCACCCTTGGGCGTGCGGGTGCTATCGGCTGGGGTTTTCGCCGTTTTTGGC
TTGAGAATGCTCTGGCAAGCGTGCAGAATGCCACCTCAACAGGCATTACCAGAAGAAGAGGAAGCCCTCAGACAAGTGAT
GCAGGCAGAAGCAAAAGGAGTTGGCCGCGGGGGGGTTAGGGCCATCGTCTGGGAAGCCTTTAGTTTGATCGCCCTAGCCG
AGTTCGGGGATAAAACCCAGATTGCTACCGTTTCCCTAGCCGCCACCCATCCGGGATTCAGTGTCTGGGCGGGGGCAACC
CTGGGTCATGGTCTGATGGTGGGGCTGGCGGTGGTGGGAGGTCGTTTTTTAGCAGCTCACATCTCTGAACGCGCCGTGCA
TTGGGTGGGGGGCGGCTTATTTCTGGTGTTTGCGTTGCTGACCGGTTGGGAGTTGGCAGGATGA

Upstream 100 bases:

>100_bases
GTTCACGCGGAGGTGAGCTTGGTGAGTCCGTCTGACTTTCCCAGCCTTCACCTCTAGGTGTGAACCGATTCCACACACAA
GAGAGGTTGGAGGCTAGAAA

Downstream 100 bases:

>100_bases
GGGATCAGCTAGAAATCGCAGGAGCCCCGCACTGTACCCGTAGGGTCAGTGCCGGGAGGAATGCGCTTTGATGAAGTACA
ATGGACTTATGAGCCAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MWAGFLSSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAMMNLLAVGTGQVLFKLLPPLGVRVLSAGVFAVFG
LRMLWQACRMPPQQALPEEEEALRQVMQAEAKGVGRGGVRAIVWEAFSLIALAEFGDKTQIATVSLAATHPGFSVWAGAT
LGHGLMVGLAVVGGRFLAAHISERAVHWVGGGLFLVFALLTGWELAG

Sequences:

>Translated_207_residues
MWAGFLSSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAMMNLLAVGTGQVLFKLLPPLGVRVLSAGVFAVFG
LRMLWQACRMPPQQALPEEEEALRQVMQAEAKGVGRGGVRAIVWEAFSLIALAEFGDKTQIATVSLAATHPGFSVWAGAT
LGHGLMVGLAVVGGRFLAAHISERAVHWVGGGLFLVFALLTGWELAG
>Mature_207_residues
MWAGFLSSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAMMNLLAVGTGQVLFKLLPPLGVRVLSAGVFAVFG
LRMLWQACRMPPQQALPEEEEALRQVMQAEAKGVGRGGVRAIVWEAFSLIALAEFGDKTQIATVSLAATHPGFSVWAGAT
LGHGLMVGLAVVGGRFLAAHISERAVHWVGGGLFLVFALLTGWELAG

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

Organism=Homo sapiens, GI32189371, Length=218, Percent_Identity=35.3211009174312, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17556152, Length=219, Percent_Identity=37.8995433789954, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17556150, Length=168, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319664, Length=234, Percent_Identity=28.2051282051282, Blast_Score=93, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281361794, Length=218, Percent_Identity=36.697247706422, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24647003, Length=218, Percent_Identity=36.697247706422, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI21357589, Length=218, Percent_Identity=36.697247706422, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI281361792, Length=156, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI281361790, Length=156, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI281361796, Length=78, Percent_Identity=46.1538461538462, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 22253; Mature: 22253

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAGFLSSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAMMNLLAVGTGQVLF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCHHHHHH
KLLPPLGVRVLSAGVFAVFGLRMLWQACRMPPQQALPEEEEALRQVMQAEAKGVGRGGVR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCHH
AIVWEAFSLIALAEFGDKTQIATVSLAATHPGFSVWAGATLGHGLMVGLAVVGGRFLAAH
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISERAVHWVGGGLFLVFALLTGWELAG
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWAGFLSSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAMMNLLAVGTGQVLF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCHHHHHH
KLLPPLGVRVLSAGVFAVFGLRMLWQACRMPPQQALPEEEEALRQVMQAEAKGVGRGGVR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCHH
AIVWEAFSLIALAEFGDKTQIATVSLAATHPGFSVWAGATLGHGLMVGLAVVGGRFLAAH
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISERAVHWVGGGLFLVFALLTGWELAG
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]