Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609569

Identifier: 86609569

GI number: 86609569

Start: 2214904

End: 2215566

Strand: Reverse

Name: 86609569

Synonym: CYB_2122

Alternate gene names: NA

Gene position: 2215566-2214904 (Counterclockwise)

Preceding gene: 86609570

Following gene: 86609568

Centisome position: 72.72

GC content: 55.35

Gene sequence:

>663_bases
GTGGCTGCTCGCTTTAATCGGGAGCTGGAAATTCAACTGGGTCAGCCAGCTTGGCAACTTCCCCCAGACCTGGAGCAACT
GCCTTTTTGGCAAGCCCAGCAGCGGGATCACCTGCAAGAGCGCCTCGGGATCCCCTTTTGGCAACTGCGTGCCCCCAAAA
AACGGGAAGCCTGTTTGGATTTGGGCTGTGGGGTAAGCTTCCTGACCTATCCCTGGAACGATTGGCAAGCCTACTTTTAC
GGCCATGAGCTGAGCGGTGAGATTGTGCGCTTTATTCGCTCGCGGGCACCCCAGCTTAACTCCAAGCTGTTCAAGTCAAT
GCAACAGGGATCCGCCCACCATTTGGAAAACTACGAGTCGGAGCAATTTGATCTGGCCATTGCCACCGGATTTTTGTACT
ACTACCCGATTGAGTACTTCGACGCGGTTTGGGCAGAGTTGATGCGAGTGTTGCGACCGGCTGCACCTGTGATTATTGAA
GTGGTCAATCCCGACTCGGTGTGGGCGGAACAATGGGGCCTCATCGAGCTATTCAAAGGCACCGAACCGATTTTCACCCC
CCTAACGGAGTGGGAGCGGCGCATCGCAGCCTTGGGGGGCAAAATTCAGAAACAGGCCAGTGGCGAACTGTTCACCACCT
ATTGGATTCAGCGCAGACCGTGA

Upstream 100 bases:

>100_bases
TAGGTTAAGTGCAAGTTAAGTTCACAACCATCTACGACAAAGCCATCAACAGATGGAGTTACCACAAACTGGGGAACGCT
GGGATCCCTACCTTGCCTCT

Downstream 100 bases:

>100_bases
TCTGCTCACAACCGGGAAAGTATCGGAGCATTCGGAGTAGTGGGGTAACCTTTAAGGCTGGGTACTAAGATTAAAAATAA
GATAAAGATTAAGATTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAARFNRELEIQLGQPAWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLDLGCGVSFLTYPWNDWQAYFY
GHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIE
VVNPDSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP

Sequences:

>Translated_220_residues
MAARFNRELEIQLGQPAWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLDLGCGVSFLTYPWNDWQAYFY
GHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIE
VVNPDSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP
>Mature_219_residues
AARFNRELEIQLGQPAWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLDLGCGVSFLTYPWNDWQAYFYG
HELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIEV
VNPDSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25807; Mature: 25676

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARFNRELEIQLGQPAWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLD
CCCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHH
LGCGVSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYES
HCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHCCCC
EQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIEVVNPDSVWAEQWGLIELFKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCEECCC
TEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP
CCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEEEEECC
>Mature Secondary Structure 
AARFNRELEIQLGQPAWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLD
CCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHH
LGCGVSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYES
HCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHCCCC
EQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIEVVNPDSVWAEQWGLIELFKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCEECCC
TEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP
CCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA