Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609497

Identifier: 86609497

GI number: 86609497

Start: 2149332

End: 2149643

Strand: Reverse

Name: 86609497

Synonym: CYB_2048

Alternate gene names: NA

Gene position: 2149643-2149332 (Counterclockwise)

Preceding gene: 86609500

Following gene: 86609495

Centisome position: 70.56

GC content: 60.58

Gene sequence:

>312_bases
ATGGGATCCCGCACCAAGTTTTTTGGCACGGTCTTGGCCATGCTGGCCGTGAACAGCATCTACATGCAGTTGCAGCAGCT
TTCTCTGCAGTTGGAAGAAAGGGATCCCGCTCCCTCTGAGCAGTCTTCTCCAGAGCCTCAAAGCAGCAAGGGCTCCGTCC
CGCCAACGCGAACGGAACGGCTGGATCCCTGGCACCGTGTTGCCCAAGTCTTGCAGGGTCTGTGGCCCGGCGATGCGAGC
TTGAAAGGACTCCGTTCCGCCAACGCGAACGGGATCCTGTCGCGAGAGTCCACGTCCCCCCTGGAGCCTTGA

Upstream 100 bases:

>100_bases
CAGGTTTATTTTCTCGCAACAGCCAGCCAAACCTGTGAGCTAAGGTGGAGCTAACGCACCGGCGACGACCCTACTCTTGT
TCTCGCACAGGGGTTGACCT

Downstream 100 bases:

>100_bases
GTGCCAAGCTGAGAGGGGATATGACGCTTTGCAAAGGGGATCAAACCCCGTACCATAGAGGAGCAGGTTTCTCCGTTTCT
CTGTTTTCAATCCCCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGSRTKFFGTVLAMLAVNSIYMQLQQLSLQLEERDPAPSEQSSPEPQSSKGSVPPTRTERLDPWHRVAQVLQGLWPGDAS
LKGLRSANANGILSRESTSPLEP

Sequences:

>Translated_103_residues
MGSRTKFFGTVLAMLAVNSIYMQLQQLSLQLEERDPAPSEQSSPEPQSSKGSVPPTRTERLDPWHRVAQVLQGLWPGDAS
LKGLRSANANGILSRESTSPLEP
>Mature_102_residues
GSRTKFFGTVLAMLAVNSIYMQLQQLSLQLEERDPAPSEQSSPEPQSSKGSVPPTRTERLDPWHRVAQVLQGLWPGDASL
KGLRSANANGILSRESTSPLEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11259; Mature: 11128

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSRTKFFGTVLAMLAVNSIYMQLQQLSLQLEERDPAPSEQSSPEPQSSKGSVPPTRTER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LDPWHRVAQVLQGLWPGDASLKGLRSANANGILSRESTSPLEP
CCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GSRTKFFGTVLAMLAVNSIYMQLQQLSLQLEERDPAPSEQSSPEPQSSKGSVPPTRTER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LDPWHRVAQVLQGLWPGDASLKGLRSANANGILSRESTSPLEP
CCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA