Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609500

Identifier: 86609500

GI number: 86609500

Start: 2151852

End: 2152631

Strand: Reverse

Name: 86609500

Synonym: CYB_2052

Alternate gene names: NA

Gene position: 2152631-2151852 (Counterclockwise)

Preceding gene: 86609501

Following gene: 86609497

Centisome position: 70.65

GC content: 53.85

Gene sequence:

>780_bases
ATGCTGCTGAAAGGCACTCGGAGCTTTGATGCAGGGGTTGGAACCCGGAATGTGGGGGTTTTGAACAAAGTGAATGCCCA
GGGCCAAGTCTCGACGTTTGTGGATGATCTCCCATTTGGGGCCTTCGGAAGAGGAACTGCAGAATACCTATCCAACCTCG
TTCAGGTGGGCAATAGCGTCGTTTTCACCCGGTATAGCTTCCCGGTGATTATGGCTCGGCAAAGTCGGGATTGGCTGCGT
TCCTGTTGTGGTCAGGAGTTGCTGCAGGTGGATGCCACAGGGCAAACCACTCAGGTGATGGATTTGAGTGCTTTTTTCCC
GCCTGGGTTTTCGCTTATCTCGGATAACTCCGCAACCAAGCTCGTCGGGCAGGAGTATTATTTTCTGGCCAATAACCAAG
GGAATCCGAGTATTCTCAAGGCCAATCCCAGTCAGGGGCTAGCGGTAGTGGTGGATGGGCGGGTGATACGAGAACAAAAT
GGTGGAGATTCTGTACCCATCCGGGATATTGACCTACAAGGAGCCAACTTAGTGGCTTTGTTGGGGCAGAGTCGTCTTTT
GGAAGATGCAGAAGGGTCTTGGCGCAGTGGGTTGGCACGGGTGTCCCCTCAGGGATCCCTGAGTCCGATTTTCCGGATCC
CGCAGGATTTTAGCTTGCAGCCGGAGAAGATAGTGGTGGAGGATGCGGGCTTTGGTTTGGTGGCCTGTCCAAGGCTTTCG
AGTAACCAGCCAGAATTCTATTCCTGTGCCCTTTACCGGGTGACCCCTAGTGGAGGGTAG

Upstream 100 bases:

>100_bases
AAACTCTAATTAATCTTCTTGGTCAAACAATGCAGAAAAAAATGAATGGCCAGGCTATTCAGAGTGGTTCCGCAGAATCG
GTGCATTTGAAGATGGGGTG

Downstream 100 bases:

>100_bases
GAGCAAGCAGGAAGGCTTGGGCTATGACTTAGAGTATTTATTCACCCGCCTGCGACACGGTATGAACAACTTCCTCCTGT
TGAAGAGCTTGCAGCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLLKGTRSFDAGVGTRNVGVLNKVNAQGQVSTFVDDLPFGAFGRGTAEYLSNLVQVGNSVVFTRYSFPVIMARQSRDWLR
SCCGQELLQVDATGQTTQVMDLSAFFPPGFSLISDNSATKLVGQEYYFLANNQGNPSILKANPSQGLAVVVDGRVIREQN
GGDSVPIRDIDLQGANLVALLGQSRLLEDAEGSWRSGLARVSPQGSLSPIFRIPQDFSLQPEKIVVEDAGFGLVACPRLS
SNQPEFYSCALYRVTPSGG

Sequences:

>Translated_259_residues
MLLKGTRSFDAGVGTRNVGVLNKVNAQGQVSTFVDDLPFGAFGRGTAEYLSNLVQVGNSVVFTRYSFPVIMARQSRDWLR
SCCGQELLQVDATGQTTQVMDLSAFFPPGFSLISDNSATKLVGQEYYFLANNQGNPSILKANPSQGLAVVVDGRVIREQN
GGDSVPIRDIDLQGANLVALLGQSRLLEDAEGSWRSGLARVSPQGSLSPIFRIPQDFSLQPEKIVVEDAGFGLVACPRLS
SNQPEFYSCALYRVTPSGG
>Mature_259_residues
MLLKGTRSFDAGVGTRNVGVLNKVNAQGQVSTFVDDLPFGAFGRGTAEYLSNLVQVGNSVVFTRYSFPVIMARQSRDWLR
SCCGQELLQVDATGQTTQVMDLSAFFPPGFSLISDNSATKLVGQEYYFLANNQGNPSILKANPSQGLAVVVDGRVIREQN
GGDSVPIRDIDLQGANLVALLGQSRLLEDAEGSWRSGLARVSPQGSLSPIFRIPQDFSLQPEKIVVEDAGFGLVACPRLS
SNQPEFYSCALYRVTPSGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27859; Mature: 27859

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKGTRSFDAGVGTRNVGVLNKVNAQGQVSTFVDDLPFGAFGRGTAEYLSNLVQVGNSV
CCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEE
VFTRYSFPVIMARQSRDWLRSCCGQELLQVDATGQTTQVMDLSAFFPPGFSLISDNSATK
EEEEECCEEEEEECCHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCCCCEEECCCCCCE
LVGQEYYFLANNQGNPSILKANPSQGLAVVVDGRVIREQNGGDSVPIRDIDLQGANLVAL
EECCEEEEEECCCCCCCEEEECCCCCEEEEECCEEEEECCCCCCCCEEEECCCCCCEEEE
LGQSRLLEDAEGSWRSGLARVSPQGSLSPIFRIPQDFSLQPEKIVVEDAGFGLVACPRLS
ECCHHHHHCCCCCHHCCCEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCCEEECCCCC
SNQPEFYSCALYRVTPSGG
CCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MLLKGTRSFDAGVGTRNVGVLNKVNAQGQVSTFVDDLPFGAFGRGTAEYLSNLVQVGNSV
CCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEE
VFTRYSFPVIMARQSRDWLRSCCGQELLQVDATGQTTQVMDLSAFFPPGFSLISDNSATK
EEEEECCEEEEEECCHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCCCCEEECCCCCCE
LVGQEYYFLANNQGNPSILKANPSQGLAVVVDGRVIREQNGGDSVPIRDIDLQGANLVAL
EECCEEEEEECCCCCCCEEEECCCCCEEEEECCEEEEECCCCCCCCEEEECCCCCCEEEE
LGQSRLLEDAEGSWRSGLARVSPQGSLSPIFRIPQDFSLQPEKIVVEDAGFGLVACPRLS
ECCHHHHHCCCCCHHCCCEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCCEEECCCCC
SNQPEFYSCALYRVTPSGG
CCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA