Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609469

Identifier: 86609469

GI number: 86609469

Start: 2124863

End: 2125189

Strand: Direct

Name: 86609469

Synonym: CYB_2020

Alternate gene names: NA

Gene position: 2124863-2125189 (Clockwise)

Preceding gene: 86609466

Following gene: 86609470

Centisome position: 69.74

GC content: 57.19

Gene sequence:

>327_bases
TTGGACAACAACAGTATCTTACGTCAGCTCTTGCTAATGGGCGTGGGCACAACCACTCTGCTGGCAGAACAGTTGAGAAA
GGCTGCCGACGACTTGGTGCAGAAGGGGCAGCTCAACCCAGAAGAGGCATCCAATGTCATCAACAACCTGCTCAACCAGG
TGAAGGCCGAGCAGAGTAACTTTGAATCCTACGTTCAGCGGCAGGTGCGCAACGTCCTGCAGGATCTGGGCGTGCCCCGC
CAATCGGAAATGGACGAGCTGCGCGGGCGGCTGGATCGGCTGGAGCGGCAGGTGCGCAATTTGGAAAATCAGGTTTACCG
CCGGTAG

Upstream 100 bases:

>100_bases
AGAAACTGGCCGAGCCGGTTGCGAAGTTGAGGGCAAACTGAGGAAAATGGGTAGTCATGGAGGCCCGTACCGTTCGCGAA
GCGTCCTTTGGAGGGCAGCA

Downstream 100 bases:

>100_bases
CCGAGCCAAGCCTTCCCCTTTTGCCGGCTTTCCTTTGCCGTTGGGCAGGGTTTTGCCGAACGTTGCGATACCCTGAAGTC
CTCTCTGGGAGAATTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSNFESYVQRQVRNVLQDLGVPR
QSEMDELRGRLDRLERQVRNLENQVYRR

Sequences:

>Translated_108_residues
MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSNFESYVQRQVRNVLQDLGVPR
QSEMDELRGRLDRLERQVRNLENQVYRR
>Mature_108_residues
MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSNFESYVQRQVRNVLQDLGVPR
QSEMDELRGRLDRLERQVRNLENQVYRR

Specific function: Unknown

COG id: COG3937

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12504; Mature: 12504

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSN
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FESYVQRQVRNVLQDLGVPRQSEMDELRGRLDRLERQVRNLENQVYRR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSN
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FESYVQRQVRNVLQDLGVPRQSEMDELRGRLDRLERQVRNLENQVYRR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA