Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609466

Identifier: 86609466

GI number: 86609466

Start: 2123138

End: 2123965

Strand: Direct

Name: 86609466

Synonym: CYB_2017

Alternate gene names: NA

Gene position: 2123138-2123965 (Clockwise)

Preceding gene: 86609465

Following gene: 86609469

Centisome position: 69.69

GC content: 57.0

Gene sequence:

>828_bases
TTGTTGCTCCACAACGCTGTCGCGACAGAGCAGCCCCTCTATGATGGACTTACCAGCCAACCCGGATGGAGTCATCGATA
TTGCTCCGCAACACTGTCGCGACTGCTGGTAAGAGAGCTGGTCATGAGCGTCAGTAGCCCTTCCTTCCGTGAACTGCCCA
TCTTAGAAAGCGGCGATCGTCTCACCCGCGATGAGTTTGAACGGCGCTATCAAGCCATGCCTCAGCTCAAAAAAGCCGAG
CTGATTGAGGGAATTGTTTACGTGGCATCTCCCCTCAGATATCGCCGACATGGCAGACCACACAGCCACATCATGGCCTG
GCTGGGAGTTTATGAAGCAGCAACGCCGGGGGTTGAGTCGGCGGGCAATCCAACCGTTCGCCTGGACTTGGACAATGAGC
CGCAGCCAGATGCCATATTGCGGATGCACGAATCTTGTGGGGGACAGTCCCGCATTAGCGAGGATGACTACATTGAGGGT
GCACCGGAGCTGATTGTGGAGATTGCCGCCAGCACAGCTTCCTACGACCTGCATGATAAGCTGCGGGCCTACCGGCGCAA
CGGCGTGCGGGAATATCTGGTCTGGCTAACCCAAGAGCAAGCCTTTCGCTGGTATGTCTTCCAGAATGGAGAGTACGTGC
AGCAACAGCCCAATGAGTTGGGCGTTTTGTACAGTCGGGTGTTTCCGGGGTTGTGGTTAGCCGTGGACGCGCTGCTGACG
GGCAACATGCAGCAGGTGTTGGGTGTGCTGCAAAGGGGAATTGAGTCGGAGGAACACCGAGAGTTTGCAGCGCGGTTGGC
AACCCGAGAAGCAGAGGCTGGAGCCTAG

Upstream 100 bases:

>100_bases
GGCAGAACCTCTTGAGCCGGTTCGGATCGAGAACTTGGACATCTGATGATGACTGCTCAATGGGTCGAATAGAAAGGGAT
CCCGTCCCATCTATGGCCCA

Downstream 100 bases:

>100_bases
GCCATGAGTCGGAGGGACGGGTTTGCGCTCAGAAAGGCCCAGGTTAATGGCTGTGGGCCAACAGGTTGGGCTCGAAGACA
GCCATCTCCAACCGAAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLLHNAVATEQPLYDGLTSQPGWSHRYCSATLSRLLVRELVMSVSSPSFRELPILESGDRLTRDEFERRYQAMPQLKKAE
LIEGIVYVASPLRYRRHGRPHSHIMAWLGVYEAATPGVESAGNPTVRLDLDNEPQPDAILRMHESCGGQSRISEDDYIEG
APELIVEIAASTASYDLHDKLRAYRRNGVREYLVWLTQEQAFRWYVFQNGEYVQQQPNELGVLYSRVFPGLWLAVDALLT
GNMQQVLGVLQRGIESEEHREFAARLATREAEAGA

Sequences:

>Translated_275_residues
MLLHNAVATEQPLYDGLTSQPGWSHRYCSATLSRLLVRELVMSVSSPSFRELPILESGDRLTRDEFERRYQAMPQLKKAE
LIEGIVYVASPLRYRRHGRPHSHIMAWLGVYEAATPGVESAGNPTVRLDLDNEPQPDAILRMHESCGGQSRISEDDYIEG
APELIVEIAASTASYDLHDKLRAYRRNGVREYLVWLTQEQAFRWYVFQNGEYVQQQPNELGVLYSRVFPGLWLAVDALLT
GNMQQVLGVLQRGIESEEHREFAARLATREAEAGA
>Mature_275_residues
MLLHNAVATEQPLYDGLTSQPGWSHRYCSATLSRLLVRELVMSVSSPSFRELPILESGDRLTRDEFERRYQAMPQLKKAE
LIEGIVYVASPLRYRRHGRPHSHIMAWLGVYEAATPGVESAGNPTVRLDLDNEPQPDAILRMHESCGGQSRISEDDYIEG
APELIVEIAASTASYDLHDKLRAYRRNGVREYLVWLTQEQAFRWYVFQNGEYVQQQPNELGVLYSRVFPGLWLAVDALLT
GNMQQVLGVLQRGIESEEHREFAARLATREAEAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31200; Mature: 31200

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHNAVATEQPLYDGLTSQPGWSHRYCSATLSRLLVRELVMSVSSPSFRELPILESGDR
CCCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LTRDEFERRYQAMPQLKKAELIEGIVYVASPLRYRRHGRPHSHIMAWLGVYEAATPGVES
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
AGNPTVRLDLDNEPQPDAILRMHESCGGQSRISEDDYIEGAPELIVEIAASTASYDLHDK
CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCHHHHH
LRAYRRNGVREYLVWLTQEQAFRWYVFQNGEYVQQQPNELGVLYSRVFPGLWLAVDALLT
HHHHHHCCHHHHHHHHHHCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
GNMQQVLGVLQRGIESEEHREFAARLATREAEAGA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLHNAVATEQPLYDGLTSQPGWSHRYCSATLSRLLVRELVMSVSSPSFRELPILESGDR
CCCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LTRDEFERRYQAMPQLKKAELIEGIVYVASPLRYRRHGRPHSHIMAWLGVYEAATPGVES
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
AGNPTVRLDLDNEPQPDAILRMHESCGGQSRISEDDYIEGAPELIVEIAASTASYDLHDK
CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCHHHHH
LRAYRRNGVREYLVWLTQEQAFRWYVFQNGEYVQQQPNELGVLYSRVFPGLWLAVDALLT
HHHHHHCCHHHHHHHHHHCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
GNMQQVLGVLQRGIESEEHREFAARLATREAEAGA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA