| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is anmK
Identifier: 86609439
GI number: 86609439
Start: 2094868
End: 2096001
Strand: Reverse
Name: anmK
Synonym: CYB_1990
Alternate gene names: 86609439
Gene position: 2096001-2094868 (Counterclockwise)
Preceding gene: 86609443
Following gene: 86609438
Centisome position: 68.8
GC content: 55.47
Gene sequence:
>1134_bases ATGATCGTCGTCGGCCTAATGTCGGGCACTTCGGTAGACGGGATCGATGTAGCCATCGTCCGCATCGAGGGCGACGATTC CCTACAGTGGGAGTTAATGCATTTCCAGACGATCCCCTATTCCCCAACGCTGCGGGCGGAGATTTTGCGGGCTGCGGATC CCAAAACCGGCACGGTAGATCACATCTGCACCTTGAACTTTCGCTTGGGTCGAGCTTTTGCGGCAGCGGCCTTGCAAGGG ATCCAGGCGGCCCATCTTACCCCCCAACAGATCGATCTCATCGGCAGCCATGGTCAAACCCTTTGGCATAACCCCAGTGG GCCAGAAGCTTCGACTTTGCAAATCGGTGAAGCTGCAGTTATTGCCGAGCTGACCGGGATCCCGGTGGTGAGCAATTTTC GGGCGCGGGACATGGCGGCAGGAGGTCAAGGCGCACCTTTGGTAGCTTTTGTGGATTGGCTGCTGTTGAGGCATCCCCAC CTTCATCGTGTGGCCCAAAACATCGGCGGCATTGCCAACCTCACCTATCTCCCCAGCCTCTACAGTGGGGGATCCCCCTT GGCTTTCGACACCGGCCCCGGCAATGTTTTGATTGATTTGGCGGTGATGCGGGCCAGTCAGGGACATCAAGCCTTTGATC GCGACGGAAAATGGGCTGCCCAAGGCCAGATCCACTGGGAAAAAATTACAGAATGGATGCGGGATCCCTATTTTCAAAAG GCACCGCCCAAAACCACTGGTCGGGAGTATTTTGGATCCCTTTATTTGGAGCAAATTTGGACCCAATTTATATCCGCTCA CGACTGTATTGCCACCCTCACGGGGTTCACAGCCTGCTCCATTGCCCAAGCCTATAGGGACTTTTTGCCCGCGACCCCAG ATCAAGTTATCCTCAGCGGTGGCGGCACCCAAAACCCTGTCCTTATGCGACTGCTGCAGGAACAACTGCCGACCACAACC CTGTTGACTTCCGACCAAGTGGGGATCCCTTCTAAGGCCAAAGAGGCCCTTGCCTTCGCGGTATTGGCCTATAAAACCTG GCAAGGTAAGACCAACAATTTACCGGAAGCAACTGGGGCAAGACATGCTGCCATCTTGGGCCAAATCACACCCTCTTGTC GTAACCAGTCCTAA
Upstream 100 bases:
>100_bases CGGTAGCTCTGGATACCCTGCCTGTATCCTAAAAAGGGGAGGGGAGAAAGAGGGCAAAACTTTAGACCTTCTCAAGCCTC TGGTGCGAGCCCCCAGCAAG
Downstream 100 bases:
>100_bases CTCATCTGTATCGTTATCTCCAACAAGCTTGAGCCATTCCTCTTACTCCCGAGGAAAGAGAAATGTCCAGAATTGCGGCG GAGCCTCTGCCGAATCCAGA
Product: anhydro-N-acetylmuramic acid kinase
Products: NA
Alternate protein names: AnhMurNAc kinase
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MIVVGLMSGTSVDGIDVAIVRIEGDDSLQWELMHFQTIPYSPTLRAEILRAADPKTGTVDHICTLNFRLGRAFAAAALQG IQAAHLTPQQIDLIGSHGQTLWHNPSGPEASTLQIGEAAVIAELTGIPVVSNFRARDMAAGGQGAPLVAFVDWLLLRHPH LHRVAQNIGGIANLTYLPSLYSGGSPLAFDTGPGNVLIDLAVMRASQGHQAFDRDGKWAAQGQIHWEKITEWMRDPYFQK APPKTTGREYFGSLYLEQIWTQFISAHDCIATLTGFTACSIAQAYRDFLPATPDQVILSGGGTQNPVLMRLLQEQLPTTT LLTSDQVGIPSKAKEALAFAVLAYKTWQGKTNNLPEATGARHAAILGQITPSCRNQS
Sequences:
>Translated_377_residues MIVVGLMSGTSVDGIDVAIVRIEGDDSLQWELMHFQTIPYSPTLRAEILRAADPKTGTVDHICTLNFRLGRAFAAAALQG IQAAHLTPQQIDLIGSHGQTLWHNPSGPEASTLQIGEAAVIAELTGIPVVSNFRARDMAAGGQGAPLVAFVDWLLLRHPH LHRVAQNIGGIANLTYLPSLYSGGSPLAFDTGPGNVLIDLAVMRASQGHQAFDRDGKWAAQGQIHWEKITEWMRDPYFQK APPKTTGREYFGSLYLEQIWTQFISAHDCIATLTGFTACSIAQAYRDFLPATPDQVILSGGGTQNPVLMRLLQEQLPTTT LLTSDQVGIPSKAKEALAFAVLAYKTWQGKTNNLPEATGARHAAILGQITPSCRNQS >Mature_377_residues MIVVGLMSGTSVDGIDVAIVRIEGDDSLQWELMHFQTIPYSPTLRAEILRAADPKTGTVDHICTLNFRLGRAFAAAALQG IQAAHLTPQQIDLIGSHGQTLWHNPSGPEASTLQIGEAAVIAELTGIPVVSNFRARDMAAGGQGAPLVAFVDWLLLRHPH LHRVAQNIGGIANLTYLPSLYSGGSPLAFDTGPGNVLIDLAVMRASQGHQAFDRDGKWAAQGQIHWEKITEWMRDPYFQK APPKTTGREYFGSLYLEQIWTQFISAHDCIATLTGFTACSIAQAYRDFLPATPDQVILSGGGTQNPVLMRLLQEQLPTTT LLTSDQVGIPSKAKEALAFAVLAYKTWQGKTNNLPEATGARHAAILGQITPSCRNQS
Specific function: Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived
COG id: COG2377
COG function: function code O; Predicted molecular chaperone distantly related to HSP70-fold metalloproteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anhydro-N-acetylmuramic acid kinase family
Homologues:
Organism=Escherichia coli, GI1787928, Length=372, Percent_Identity=40.0537634408602, Blast_Score=234, Evalue=7e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ANMK_SYNJB (Q2JK57)
Other databases:
- EMBL: CP000240 - RefSeq: YP_478201.1 - ProteinModelPortal: Q2JK57 - SMR: Q2JK57 - STRING: Q2JK57 - GeneID: 3900003 - GenomeReviews: CP000240_GR - KEGG: cyb:CYB_1990 - TIGR: CYB_1990 - eggNOG: COG2377 - HOGENOM: HBG324434 - OMA: GSHGQTV - PhylomeDB: Q2JK57 - ProtClustDB: PRK09585 - BioCyc: SSP321332:CYB_1990-MONOMER - HAMAP: MF_01270 - InterPro: IPR005338
Pfam domain/function: PF03702 UPF0075
EC number: NA
Molecular weight: Translated: 40752; Mature: 40752
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVGLMSGTSVDGIDVAIVRIEGDDSLQWELMHFQTIPYSPTLRAEILRAADPKTGTVD CEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCC HICTLNFRLGRAFAAAALQGIQAAHLTPQQIDLIGSHGQTLWHNPSGPEASTLQIGEAAV EEEEEEHHHHHHHHHHHHHCCHHHCCCHHHHHEECCCCCEEEECCCCCCCCEEECCCCEE IAELTGIPVVSNFRARDMAAGGQGAPLVAFVDWLLLRHPHLHRVAQNIGGIANLTYLPSL EHHHCCCCEECCCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCHH YSGGSPLAFDTGPGNVLIDLAVMRASQGHQAFDRDGKWAAQGQIHWEKITEWMRDPYFQK HCCCCCEEEECCCCCEEEEEEEHHCCCCCHHHCCCCCEEECCCEEHHHHHHHHHCCCCCC APPKTTGREYFGSLYLEQIWTQFISAHDCIATLTGFTACSIAQAYRDFLPATPDQVILSG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GGTQNPVLMRLLQEQLPTTTLLTSDQVGIPSKAKEALAFAVLAYKTWQGKTNNLPEATGA CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RHAAILGQITPSCRNQS CHHHHHHCCCCCCCCCC >Mature Secondary Structure MIVVGLMSGTSVDGIDVAIVRIEGDDSLQWELMHFQTIPYSPTLRAEILRAADPKTGTVD CEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCC HICTLNFRLGRAFAAAALQGIQAAHLTPQQIDLIGSHGQTLWHNPSGPEASTLQIGEAAV EEEEEEHHHHHHHHHHHHHCCHHHCCCHHHHHEECCCCCEEEECCCCCCCCEEECCCCEE IAELTGIPVVSNFRARDMAAGGQGAPLVAFVDWLLLRHPHLHRVAQNIGGIANLTYLPSL EHHHCCCCEECCCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCHH YSGGSPLAFDTGPGNVLIDLAVMRASQGHQAFDRDGKWAAQGQIHWEKITEWMRDPYFQK HCCCCCEEEECCCCCEEEEEEEHHCCCCCHHHCCCCCEEECCCEEHHHHHHHHHCCCCCC APPKTTGREYFGSLYLEQIWTQFISAHDCIATLTGFTACSIAQAYRDFLPATPDQVILSG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GGTQNPVLMRLLQEQLPTTTLLTSDQVGIPSKAKEALAFAVLAYKTWQGKTNNLPEATGA CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RHAAILGQITPSCRNQS CHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA