Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yiiP [C]

Identifier: 86609387

GI number: 86609387

Start: 2015190

End: 2016095

Strand: Direct

Name: yiiP [C]

Synonym: CYB_1931

Alternate gene names: 86609387

Gene position: 2015190-2016095 (Clockwise)

Preceding gene: 86609384

Following gene: 86609389

Centisome position: 66.14

GC content: 61.37

Gene sequence:

>906_bases
GTGAGCTTTCTGGATTCTGCTGCCATAGCCAGCCGCCGTCAGCGCCAAGTGCAGAGGGTGCTGTACGTCACGCTAGGGCT
AAATGTCCTGGTGTTTCTGATCAAGTTAATCCTGGGGCTGACGACGGGATCCCTAAGCCTAATTGCCGATGCCCTGCACA
GCTCCACCGACAGCGCCAGCAACATTTTGGGCTTGGTGGCCGTGCGCTTTTCTTCGCCAGAGCCCGATGACGACCATCCC
TACGGCCATCGCAAGTTTGAAGCCATTGGAGCGCTGGGGATCGCCGCCTTTTTGGGGATGGCCAGCCTGGAGATCCTGCG
CACAGCCGTGGAGCGGTTTTGGGAGCCCCAGCCCCACCTGCAGATCGATGAGCTGACCTTGGGGATGATGGTGGGCGTGC
TGGGCATTAATGTCTTTGTCACCCTCTACGAGCACCGCTGGGGCAAAGCTCTGTCCAGCTCGCTGCTGTTGGCCGATGCG
CGCCATACCCTCAGCGACGTTGGGGTGACGCTGACGGTGTTGCTGGGGTTGGCCGGCATGCATTATTGGGGGATCCCTTG
GTTGGATCAAGCCCTGGCTTTGCCGGTGGCGCTGCTGGTGCTCCGAAGCGGCTGGGAAGTGCTGCAGGAGAATCTTCCCT
ACCTCACAGATCGGGTGGCGATCCCTGCCGAGGCCCTGCGGGATCTGATCCTGAGCGTGCCAGGCGTGCTCGACTGCCAT
GACATCACTTCCCGCGGCATCCCAGGGGAAATGGTCTTTATCGAGATGCACCTGGTGGTGGAGCCACAGGACATTGAGTC
CGCCCACCGCCTCACTGAGGAAGTCGAACACCTCCTGCAAGGGCGCTACGGGCCGGCGCGGATCCTCATCCACCTGGAGC
CTCGCTCCCATATCGAGCAACCCTAG

Upstream 100 bases:

>100_bases
CTAAGCCTTAGCAGCTTGCTTTTAGGGTACCCTCCCTTACCCCTATTGAGGTCGGTGACAGAATAAAGCGGGATATCTGT
GGATCCCCGCCCGAGCTGCA

Downstream 100 bases:

>100_bases
CAGGAGCTCGCCACCTGCCAACAGATAGCCTAGCCAAACCTCAGGGATCCTGATGTTTCCAAAAGAACACCAAAACGGTA
TCAACGCCTCTGCGAGCGTC

Product: cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSASNILGLVAVRFSSPEPDDDHP
YGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHLQIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADA
RHTLSDVGVTLTVLLGLAGMHYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH
DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQP

Sequences:

>Translated_301_residues
MSFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSASNILGLVAVRFSSPEPDDDHP
YGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHLQIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADA
RHTLSDVGVTLTVLLGLAGMHYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH
DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQP
>Mature_300_residues
SFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSASNILGLVAVRFSSPEPDDDHPY
GHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHLQIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADAR
HTLSDVGVTLTVLLGLAGMHYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCHD
ITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQP

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=288, Percent_Identity=29.1666666666667, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786966, Length=298, Percent_Identity=26.8456375838926, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=229, Percent_Identity=24.8908296943231, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323831, Length=222, Percent_Identity=25.6756756756757, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33168; Mature: 33037

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH
NILGLVAVRFSSPEPDDDHPYGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHL
HHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADARHTLSDVGVTLTVLLGLAGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCH
DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQ
HHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCC
P
C
>Mature Secondary Structure 
SFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH
NILGLVAVRFSSPEPDDDHPYGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHL
HHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADARHTLSDVGVTLTVLLGLAGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCH
DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQ
HHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]