Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609384

Identifier: 86609384

GI number: 86609384

Start: 2012261

End: 2012626

Strand: Direct

Name: 86609384

Synonym: CYB_1928

Alternate gene names: NA

Gene position: 2012261-2012626 (Clockwise)

Preceding gene: 86609379

Following gene: 86609387

Centisome position: 66.05

GC content: 57.1

Gene sequence:

>366_bases
GTGAATAAGTGTCGCACGATCCTGACGCCGCAGGTTCTCGACAGCGTGGCAGAGTACTTCAAGGTTTTGGCGGAACCCAG
CCGCCTGCAGATCCTGTGTCAGTTGCGCTCGGGGCCCAAGAACGTCACCCAAATCTTGGAAGCTACGGGTATGGGCCAGG
CCAATGTTTCCAAGCACCTCAAGATCCTGACCCAGGCAGGGATCGTCAGCCGTCAGCCCAAGGGGGTGAGTGTTTATTAC
CAAATTGCGGATCCCATGTGCTTTGAGCTGTGTGAAGTGGTATGTCGGCAGTTGGTGAGTCGGCTACAACAGCAAGCCCG
CCAACTGGAGCCGCTGGCAGCCATTCACCCAGGTCAATCGAGCTGA

Upstream 100 bases:

>100_bases
AGGAACACTATATAACTATCTAGTGTTAAAATTAAAATCAAGTTGACGAACGGCGCAAGCAGGTTTGTTGATTGGGGAAA
AGCCGGTGAGCAGAGCGGAT

Downstream 100 bases:

>100_bases
GGCGAAAATGGTTCTCAAACGGGTTGGGGTTGTCGGGAGCACCTGATGATTAGTCCAGCCCCAGCCGCTGACGAAAGTAA
GGGATGGTCTGTTGCAGCCC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Regulatory Protein; ArsR Family Transcriptional Repressor; Regulatory Proteins ArsR Family Protein; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Bacterial Regulatory Protein ArsR Family

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNKCRTILTPQVLDSVAEYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILTQAGIVSRQPKGVSVYY
QIADPMCFELCEVVCRQLVSRLQQQARQLEPLAAIHPGQSS

Sequences:

>Translated_121_residues
MNKCRTILTPQVLDSVAEYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILTQAGIVSRQPKGVSVYY
QIADPMCFELCEVVCRQLVSRLQQQARQLEPLAAIHPGQSS
>Mature_121_residues
MNKCRTILTPQVLDSVAEYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILTQAGIVSRQPKGVSVYY
QIADPMCFELCEVVCRQLVSRLQQQARQLEPLAAIHPGQSS

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13407; Mature: 13407

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKCRTILTPQVLDSVAEYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHL
CCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
KILTQAGIVSRQPKGVSVYYQIADPMCFELCEVVCRQLVSRLQQQARQLEPLAAIHPGQS
HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
S
C
>Mature Secondary Structure
MNKCRTILTPQVLDSVAEYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHL
CCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
KILTQAGIVSRQPKGVSVYYQIADPMCFELCEVVCRQLVSRLQQQARQLEPLAAIHPGQS
HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA