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The map label for this gene is ydaM [H]

Identifier: 86609246

GI number: 86609246

Start: 1875397

End: 1876878

Strand: Direct

Name: ydaM [H]

Synonym: CYB_1788

Alternate gene names: 86609246

Gene position: 1875397-1876878 (Clockwise)

Preceding gene: 86609245

Following gene: 86609247

Centisome position: 61.56

GC content: 61.2

Gene sequence:

>1482_bases
ATGTCTGAGTTTGTCTGGTCAGAGCCAGAGCCTCTCGAGGATCTTCATCTTCCCGATTGGTTGCTCACCTCGGCCCAGCG
CCGCCGTCTCAAGGCTCTGCTGGTTCTGGCCATGGTGTGGGGGTTGGTCAGCCTGATGCATGTGGTGCCGACGGCCCGTT
GGATCACCGTTGGTTTGGCCACGTTCATGGTGATCCACATTAGCCGCTTATTTCGCCTGCAACCGGCGACCTCCCTGCCC
CCTCTGAGACTTCCTCCTGCCGCTGCGACCCGCCGGGATCCCAGGTCAACAGATAACAGCGATGACCCTAACAACAATGA
CTCTGTCCTGCCAATGCAACGGGATGGGCAGAGCGGGCTTTCTGAGTTGGGCGGGCTGGCCTTGCCCCGTGTGGCTGTGT
TGATCCCAGCCAAGAATGAGAGCGCAGTGCTCCCACGGCTGTTGCACAGCTTGACCCAGCTCCGTTACCCCACCAGCCAT
CTGGAGCTGTGGGCCATCGACGACAACAGCAGCGATGCCACCCCTGAAGTTCTGCGGGAAGCCCAAAAGTGGATCCCGCA
TCTGCGGGTTTACCGGCGGCAGCCGGGGCGGGGCGGGGGCAAGTCCGGTGCCCTCAACGAGGTACTGCCCCTGACTCAAG
GGGAGATCATCCTGGTCTGCGATGCCGATGCTGTGGTGCCCTCGGATTTTCTTGCCCGCACTCTGCCCTTGTTTGTTCAA
GTGGGAAGCCTGCGCAGCCGTTTCAGCAGACGGACGGTAGGCGCTGTCCAGGTGCGCAAGGCCCTGAGCAACCCCAGCGT
CAACTTCTGGACTCTGGGGCAGGTGGCGGAAATGGCCTCTGATGCTTACTTCCAGCAGCAGCGCGTGGCTGTGAGGGGTA
TTGGCGAGCTACGCGGCAATGGCCAACTGGTGCGGCGAGATGTTTTGGAAAAGTGCGGCGGCTGGAACGAGGCCACCCTC
ACTGACGACTTGGATCTCACCTTTAAGCTGCACCTGGCGGGCGTAGATATCGCCTTTCTGCCAGAGCCGGCCATCGTCGA
AGAAGGGGTCACCTCTTGGAAAAGCCTCTGGCACCAGCGCTGCCGCTGGGCAGAAGGGGGCTACCAGCGCTATCTCGACT
ACTGGCCAGGGATCCTCGGTCGCCGGATGGGGATGGCCAAAACAGTAGATCTCTGGGCCTTCTTTATTTCTCAGTACTTG
CTGCCGATGGCCTTGGTTCCCGATACCCTCTGGGTGCTGTTGACGGGCCACTCCTCGGTGCTGCTCCCCTTGAACGCTCT
GGTGATGGGCTGCTTGACGGTGGCTTTTTACCGGGGGCTACGCCAGGTGGAGGGCTTGCGCGGACGGCGACTTTGGTGGC
ACACCGCCCTGGGCTTGGTCTACATGCTCCACTGGCTGCCGGTTATGATCGCCACAACCGCTCGCATGTGTGTACAGCCC
AAGCGCCTAAGGTGGGTGAAAACTGTTCATCACGGCGCTTGA

Upstream 100 bases:

>100_bases
CAATGGGTGACAATAGGTAACAACCTCTTAACGGCCTTTGGGTTAACGCTTGGGCAGGCTGGTGAGGTTGGGTAGCGTTG
TCGCCCGTGGGAGGATCCCC

Downstream 100 bases:

>100_bases
GGTCAGCAAGTTGGATCCAATCCTGCTATCCTAGTCAAGCACCTGCTCACGCCCTGCTCGACCATGGCCCGCCTCTACTA
CGACACCGACGCCAATCTGG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSEFVWSEPEPLEDLHLPDWLLTSAQRRRLKALLVLAMVWGLVSLMHVVPTARWITVGLATFMVIHISRLFRLQPATSLP
PLRLPPAAATRRDPRSTDNSDDPNNNDSVLPMQRDGQSGLSELGGLALPRVAVLIPAKNESAVLPRLLHSLTQLRYPTSH
LELWAIDDNSSDATPEVLREAQKWIPHLRVYRRQPGRGGGKSGALNEVLPLTQGEIILVCDADAVVPSDFLARTLPLFVQ
VGSLRSRFSRRTVGAVQVRKALSNPSVNFWTLGQVAEMASDAYFQQQRVAVRGIGELRGNGQLVRRDVLEKCGGWNEATL
TDDLDLTFKLHLAGVDIAFLPEPAIVEEGVTSWKSLWHQRCRWAEGGYQRYLDYWPGILGRRMGMAKTVDLWAFFISQYL
LPMALVPDTLWVLLTGHSSVLLPLNALVMGCLTVAFYRGLRQVEGLRGRRLWWHTALGLVYMLHWLPVMIATTARMCVQP
KRLRWVKTVHHGA

Sequences:

>Translated_493_residues
MSEFVWSEPEPLEDLHLPDWLLTSAQRRRLKALLVLAMVWGLVSLMHVVPTARWITVGLATFMVIHISRLFRLQPATSLP
PLRLPPAAATRRDPRSTDNSDDPNNNDSVLPMQRDGQSGLSELGGLALPRVAVLIPAKNESAVLPRLLHSLTQLRYPTSH
LELWAIDDNSSDATPEVLREAQKWIPHLRVYRRQPGRGGGKSGALNEVLPLTQGEIILVCDADAVVPSDFLARTLPLFVQ
VGSLRSRFSRRTVGAVQVRKALSNPSVNFWTLGQVAEMASDAYFQQQRVAVRGIGELRGNGQLVRRDVLEKCGGWNEATL
TDDLDLTFKLHLAGVDIAFLPEPAIVEEGVTSWKSLWHQRCRWAEGGYQRYLDYWPGILGRRMGMAKTVDLWAFFISQYL
LPMALVPDTLWVLLTGHSSVLLPLNALVMGCLTVAFYRGLRQVEGLRGRRLWWHTALGLVYMLHWLPVMIATTARMCVQP
KRLRWVKTVHHGA
>Mature_492_residues
SEFVWSEPEPLEDLHLPDWLLTSAQRRRLKALLVLAMVWGLVSLMHVVPTARWITVGLATFMVIHISRLFRLQPATSLPP
LRLPPAAATRRDPRSTDNSDDPNNNDSVLPMQRDGQSGLSELGGLALPRVAVLIPAKNESAVLPRLLHSLTQLRYPTSHL
ELWAIDDNSSDATPEVLREAQKWIPHLRVYRRQPGRGGGKSGALNEVLPLTQGEIILVCDADAVVPSDFLARTLPLFVQV
GSLRSRFSRRTVGAVQVRKALSNPSVNFWTLGQVAEMASDAYFQQQRVAVRGIGELRGNGQLVRRDVLEKCGGWNEATLT
DDLDLTFKLHLAGVDIAFLPEPAIVEEGVTSWKSLWHQRCRWAEGGYQRYLDYWPGILGRRMGMAKTVDLWAFFISQYLL
PMALVPDTLWVLLTGHSSVLLPLNALVMGCLTVAFYRGLRQVEGLRGRRLWWHTALGLVYMLHWLPVMIATTARMCVQPK
RLRWVKTVHHGA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=252, Percent_Identity=26.984126984127, Blast_Score=85, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 55368; Mature: 55237

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFVWSEPEPLEDLHLPDWLLTSAQRRRLKALLVLAMVWGLVSLMHVVPTARWITVGLA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TFMVIHISRLFRLQPATSLPPLRLPPAAATRRDPRSTDNSDDPNNNDSVLPMQRDGQSGL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
SELGGLALPRVAVLIPAKNESAVLPRLLHSLTQLRYPTSHLELWAIDDNSSDATPEVLRE
HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHH
AQKWIPHLRVYRRQPGRGGGKSGALNEVLPLTQGEIILVCDADAVVPSDFLARTLPLFVQ
HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
VGSLRSRFSRRTVGAVQVRKALSNPSVNFWTLGQVAEMASDAYFQQQRVAVRGIGELRGN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GQLVRRDVLEKCGGWNEATLTDDLDLTFKLHLAGVDIAFLPEPAIVEEGVTSWKSLWHQR
CHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHH
CRWAEGGYQRYLDYWPGILGRRMGMAKTVDLWAFFISQYLLPMALVPDTLWVLLTGHSSV
HCCCCCHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE
LLPLNALVMGCLTVAFYRGLRQVEGLRGRRLWWHTALGLVYMLHWLPVMIATTARMCVQP
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KRLRWVKTVHHGA
HHHHHHHHHHCCC
>Mature Secondary Structure 
SEFVWSEPEPLEDLHLPDWLLTSAQRRRLKALLVLAMVWGLVSLMHVVPTARWITVGLA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TFMVIHISRLFRLQPATSLPPLRLPPAAATRRDPRSTDNSDDPNNNDSVLPMQRDGQSGL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
SELGGLALPRVAVLIPAKNESAVLPRLLHSLTQLRYPTSHLELWAIDDNSSDATPEVLRE
HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHH
AQKWIPHLRVYRRQPGRGGGKSGALNEVLPLTQGEIILVCDADAVVPSDFLARTLPLFVQ
HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
VGSLRSRFSRRTVGAVQVRKALSNPSVNFWTLGQVAEMASDAYFQQQRVAVRGIGELRGN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GQLVRRDVLEKCGGWNEATLTDDLDLTFKLHLAGVDIAFLPEPAIVEEGVTSWKSLWHQR
CHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHH
CRWAEGGYQRYLDYWPGILGRRMGMAKTVDLWAFFISQYLLPMALVPDTLWVLLTGHSSV
HCCCCCHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE
LLPLNALVMGCLTVAFYRGLRQVEGLRGRRLWWHTALGLVYMLHWLPVMIATTARMCVQP
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KRLRWVKTVHHGA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]