Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609245

Identifier: 86609245

GI number: 86609245

Start: 1874748

End: 1875209

Strand: Direct

Name: 86609245

Synonym: CYB_1787

Alternate gene names: NA

Gene position: 1874748-1875209 (Clockwise)

Preceding gene: 86609243

Following gene: 86609246

Centisome position: 61.53

GC content: 51.3

Gene sequence:

>462_bases
ATGGAAGAAAACAACGTCAGCAACGGCACTCAATTACTGCTCAAACGCAACATTCCCGTTAAGGTGGTGGTCACACCCCT
TTGGAAAAAGGAAATGCAGGAGCAATTGGAGCGGCAGATCGAAGCCACCGATGCTCAGATGCAACAGCTGGAGTTTCAGG
GCAAGCGGGCTATTGCCGAACTGGAGAAACAGAGCCCCAACCCCAACAGCCCCCAAGTGCTCCAACAGGTGGAAGCGGTG
AAAAGCCGCGTGAACGAGCAGAAAATCCGCCTCTTGGATCAGAAAAACCAATTGTTGCAGCAGATCAACCAACTGAGCAC
CCTGGAGCTTAACCAAGAAGTGCTGCAAGGCAATGTGGAGAGCTTCTTCCGAGTCCAAAAAGGAGACAACCTGATCCAGA
AAATGCAGGTCGAGATCCTTCTGGAAGATGGGGTGATCAAAGAGATTCGCGGTAACCCATAG

Upstream 100 bases:

>100_bases
CTGTCAAGCTCCTCTTCCCCAACCCCAGAGCTTTTGAGGGGAGCTTTCTACAATGGGCACAAGCCCCTGGTTTGGTTGGT
CGTCTGCCTGGATGAGTCTT

Downstream 100 bases:

>100_bases
GCTACTCACCCCCTTGCCGGAGAAGCGGCAGTCGGGATCCCCAATTTTTCTCGCCTGTAGGTTCTCGAGAACTCCGTTTC
GCCAACACAATGGGTGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEENNVSNGTQLLLKRNIPVKVVVTPLWKKEMQEQLERQIEATDAQMQQLEFQGKRAIAELEKQSPNPNSPQVLQQVEAV
KSRVNEQKIRLLDQKNQLLQQINQLSTLELNQEVLQGNVESFFRVQKGDNLIQKMQVEILLEDGVIKEIRGNP

Sequences:

>Translated_153_residues
MEENNVSNGTQLLLKRNIPVKVVVTPLWKKEMQEQLERQIEATDAQMQQLEFQGKRAIAELEKQSPNPNSPQVLQQVEAV
KSRVNEQKIRLLDQKNQLLQQINQLSTLELNQEVLQGNVESFFRVQKGDNLIQKMQVEILLEDGVIKEIRGNP
>Mature_153_residues
MEENNVSNGTQLLLKRNIPVKVVVTPLWKKEMQEQLERQIEATDAQMQQLEFQGKRAIAELEKQSPNPNSPQVLQQVEAV
KSRVNEQKIRLLDQKNQLLQQINQLSTLELNQEVLQGNVESFFRVQKGDNLIQKMQVEILLEDGVIKEIRGNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17652; Mature: 17652

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENNVSNGTQLLLKRNIPVKVVVTPLWKKEMQEQLERQIEATDAQMQQLEFQGKRAIAE
CCCCCCCCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKQSPNPNSPQVLQQVEAVKSRVNEQKIRLLDQKNQLLQQINQLSTLELNQEVLQGNVE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SFFRVQKGDNLIQKMQVEILLEDGVIKEIRGNP
HHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MEENNVSNGTQLLLKRNIPVKVVVTPLWKKEMQEQLERQIEATDAQMQQLEFQGKRAIAE
CCCCCCCCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKQSPNPNSPQVLQQVEAVKSRVNEQKIRLLDQKNQLLQQINQLSTLELNQEVLQGNVE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SFFRVQKGDNLIQKMQVEILLEDGVIKEIRGNP
HHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA