| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ilvC [H]
Identifier: 86609247
GI number: 86609247
Start: 1876942
End: 1877934
Strand: Direct
Name: ilvC [H]
Synonym: CYB_1789
Alternate gene names: 86609247
Gene position: 1876942-1877934 (Clockwise)
Preceding gene: 86609246
Following gene: 86609248
Centisome position: 61.61
GC content: 60.12
Gene sequence:
>993_bases ATGGCCCGCCTCTACTACGACACCGACGCCAATCTGGAGCCTTTGGCCGATAAAACCGTTGCCATCATCGGCTATGGCAG CCAAGGCCACGCCCACGCCCTCAATTTGCGCGATAGCGGTGTCCAGGTCATCGTTGGCCTTTACCCTGGCAGCCCTTCCT GGCCCAAAGCCGAGCAAGACGGCTTGATGGTCAAAACGGTGGCGGATGCTGCCGCTGCCGCCGACTGGGTGATGATTTTA CTGCCCGATGAAGTGCAAAAGGCCGTTTTCCAGGGCGAAATCCGTCCCCACCTGCAGCCGGGGAACGTGCTCCTCTTTGC CCATGGCTTCAACATTCACTTCGGGCAGATCCAGCCGCCGGCAAACGTGGATGTCATCATGGTTGCCCCCAAAGGCCCTG GGCACTTGGTGCGGCGCACCTACCAAGCGGGGGAAGGGGTGCCCTGCCTGTTTGCCGTCTATCAAGATGCCTCGGGAATG GCACGGGAGCGGGCCATGGCCTATGCCAAAGCCATCGGTGGCACGCGGGCCGGCATTTTGGAAACCACCTTCCGGGAAGA GACCGAAACCGACCTCTTTGGCGAGCAGGTGGTGCTCTGCGGTGGTCTGACGGCTCTGATCAAAGCGGGGTTTGAAACCT TGGTGGAAGCGGGCTACCAGCCGGAACTGGCCTACTTCGAGTGCCTGCACGAGGTGAAGCTGATCGTGGATCTCATTGTC GAGGGGGGCTTGGAGAAAATGCGCCACAGCATCTCCAACACGGCAGAATACGGCGACTACACCCGTGGCCCCCGCATCAT CACGGAGCAAACCCGCGCTGAAATGAAACGGATCCTCGCCGAGATTCAAAGCGGCCAATTTGCCCGTGAATTTGTCTTGG AAAATCAGGCCGGCAAGCCAGGGCTTACTGCGATGCGGCGCCGCGAGGCCGAACACCCCATTGAACAGGTGGGCAGGGAG CTGCGGGCCATGTTTAGCTGGCTAAAGAAATAG
Upstream 100 bases:
>100_bases CCTAAGGTGGGTGAAAACTGTTCATCACGGCGCTTGAGGTCAGCAAGTTGGATCCAATCCTGCTATCCTAGTCAAGCACC TGCTCACGCCCTGCTCGACC
Downstream 100 bases:
>100_bases TCGGGTATCTGGAGCTGAGGGTAGACCATCTCTGTGCTGGATCTGAAGCTGCTGCGGGATCGCCCTGAACAAGTACGCCA AGCCCTGCAAAATCGCCGGG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MARLYYDTDANLEPLADKTVAIIGYGSQGHAHALNLRDSGVQVIVGLYPGSPSWPKAEQDGLMVKTVADAAAAADWVMIL LPDEVQKAVFQGEIRPHLQPGNVLLFAHGFNIHFGQIQPPANVDVIMVAPKGPGHLVRRTYQAGEGVPCLFAVYQDASGM ARERAMAYAKAIGGTRAGILETTFREETETDLFGEQVVLCGGLTALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLIV EGGLEKMRHSISNTAEYGDYTRGPRIITEQTRAEMKRILAEIQSGQFAREFVLENQAGKPGLTAMRRREAEHPIEQVGRE LRAMFSWLKK
Sequences:
>Translated_330_residues MARLYYDTDANLEPLADKTVAIIGYGSQGHAHALNLRDSGVQVIVGLYPGSPSWPKAEQDGLMVKTVADAAAAADWVMIL LPDEVQKAVFQGEIRPHLQPGNVLLFAHGFNIHFGQIQPPANVDVIMVAPKGPGHLVRRTYQAGEGVPCLFAVYQDASGM ARERAMAYAKAIGGTRAGILETTFREETETDLFGEQVVLCGGLTALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLIV EGGLEKMRHSISNTAEYGDYTRGPRIITEQTRAEMKRILAEIQSGQFAREFVLENQAGKPGLTAMRRREAEHPIEQVGRE LRAMFSWLKK >Mature_329_residues ARLYYDTDANLEPLADKTVAIIGYGSQGHAHALNLRDSGVQVIVGLYPGSPSWPKAEQDGLMVKTVADAAAAADWVMILL PDEVQKAVFQGEIRPHLQPGNVLLFAHGFNIHFGQIQPPANVDVIMVAPKGPGHLVRRTYQAGEGVPCLFAVYQDASGMA RERAMAYAKAIGGTRAGILETTFREETETDLFGEQVVLCGGLTALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLIVE GGLEKMRHSISNTAEYGDYTRGPRIITEQTRAEMKRILAEIQSGQFAREFVLENQAGKPGLTAMRRREAEHPIEQVGREL RAMFSWLKK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=287, Percent_Identity=36.9337979094077, Blast_Score=145, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6323387, Length=255, Percent_Identity=38.4313725490196, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 36278; Mature: 36147
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLYYDTDANLEPLADKTVAIIGYGSQGHAHALNLRDSGVQVIVGLYPGSPSWPKAEQD CCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCC GLMVKTVADAAAAADWVMILLPDEVQKAVFQGEIRPHLQPGNVLLFAHGFNIHFGQIQPP CEEEEHHHHHHHHCCEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCC ANVDVIMVAPKGPGHLVRRTYQAGEGVPCLFAVYQDASGMARERAMAYAKAIGGTRAGIL CCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHH ETTFREETETDLFGEQVVLCGGLTALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLIV HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLEKMRHSISNTAEYGDYTRGPRIITEQTRAEMKRILAEIQSGQFAREFVLENQAGKP HCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC GLTAMRRREAEHPIEQVGRELRAMFSWLKK CHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLYYDTDANLEPLADKTVAIIGYGSQGHAHALNLRDSGVQVIVGLYPGSPSWPKAEQD CEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCC GLMVKTVADAAAAADWVMILLPDEVQKAVFQGEIRPHLQPGNVLLFAHGFNIHFGQIQPP CEEEEHHHHHHHHCCEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCC ANVDVIMVAPKGPGHLVRRTYQAGEGVPCLFAVYQDASGMARERAMAYAKAIGGTRAGIL CCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHH ETTFREETETDLFGEQVVLCGGLTALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLIV HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLEKMRHSISNTAEYGDYTRGPRIITEQTRAEMKRILAEIQSGQFAREFVLENQAGKP HCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC GLTAMRRREAEHPIEQVGRELRAMFSWLKK CHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA