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The map label for this gene is sufD [C]

Identifier: 86608871

GI number: 86608871

Start: 1470381

End: 1471673

Strand: Reverse

Name: sufD [C]

Synonym: CYB_1402

Alternate gene names: 86608871

Gene position: 1471673-1470381 (Counterclockwise)

Preceding gene: 86608872

Following gene: 86608870

Centisome position: 48.3

GC content: 61.56

Gene sequence:

>1293_bases
ATGAGCGCCACCTTGCCCAAACCTTTTGCCCCAGAGAGCCGCCTATTCCTGGAGCACATCCTCGGCCAAATCCCGGAAAG
GCAGGATCCCTACACCACCCTTAGGCAGCAGGCCCGCGCCCAATTGGCCGAACTGGGGATCCCGACCCCACGGGAAGAGG
ATTGGAAATACAGCGATCTCTCGCCACTGCTGGCCCACAAGTTTCGCCTGGCTGCCGCGGGGGATCCGTCTCTGGATGCA
GCAACCCTAGAACCTTGGCTTTGGCCGGAAACCAGCTATAGCCGCGCCGTGTTCGTCAACGGCTACTTTGCCCCCCAGCT
TTCTGATTTGAGCGGCCTGCCCACCGCTTTGCAGGTGATCCCTTTAGCCCAAGCCCCAGGGGAGTTGCTGCAAACCCTGG
CCAAGACGGATGTGTTTACGGCCCTCAACACCGCTCATCTGGGAGATGGGATCCAGATTGGCCTACAGCCCGGCCAGGAA
GTTCCGTCACCGCTGCACCTGCTGTTCATAACGGTGGCTCCTGAGGGAGAGGCCGTTTTGGCCCAGCCCCGCTGCCTGCT
GTCTTTGCAAGCCCACAGCTCCCTCACGCTGATCGAAGATCATGTATCCCTGGGATCCGGGATCCCCTTTGGCAACGCGG
TTACGGAGATCGCCCTGGCAGAGGGATCCCGCTTGCACCATGTGATTTTGCAAAGGCAGGGATCCCCAGCCTTCCACATC
AACCAGACCGCCGTGCGCCAAAGCCGCAACAGCCACTACCGCCTCCAGTCGATTCAGTGGGGATCCCAGTTTTCTCGCCA
CAACCTGGAGATCACCCAAGCCGGAGCCCAGGCCCACACCCAACTGCAGGGGCTAACGCTGCTGAAGGGATCCCAGCACA
GCGACACCCACTCCCGCCTGGTGCATCAGGCCCCCCACGGCAGCAGCCGCCAATTGCACAAGTGCATCGTTGACGAGACG
GCCCATGCGGTCTTCAGCGGACGGATTCTGGTGAGCCGAGAGGCCCAACTGACGGACGCCGCCCAGACCAACCGCAACCT
GCTCCTAGGCCCCAAAGCGCGGGTCGACACCCAGCCGCAACTGGAGATCTTTGCCGACAACGTCAAATGCGCCCATGGGG
CCACCGTCAGCCAACTGGAGGCAGAAGAGATCTTTTATCTGCAAAGCCGGGGTATTCCCCAAGCTGATGCCAGGCAACTT
CTCACCTGCGCTTTTGCGGCAGAAGTTCTGGAAGGGATCCCGTTGGCTCAACTTCCCGCCCTGGTGGCCCGCCAGTTGGC
TGGGATCCCGTGA

Upstream 100 bases:

>100_bases
AGACCTTGGCGCTGGAGCTGGAAGAACGGGGCTACGACTGGATCAAAACTCAGTCGGGTCAAGAACCGGCAGCTGCGACA
TCTCGGCAGGAGAAAGAGGG

Downstream 100 bases:

>100_bases
ATCCAATCAATTCCAATAACAATAATAAGTTGTTGCTCCCCCATGACCCTCAAGAGTGACCAGACTTGGGCGTGATGGAT
AGGCATCACTGACGCGACAG

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSATLPKPFAPESRLFLEHILGQIPERQDPYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDA
ATLEPWLWPETSYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQE
VPSPLHLLFITVAPEGEAVLAQPRCLLSLQAHSSLTLIEDHVSLGSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHI
NQTAVRQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLVHQAPHGSSRQLHKCIVDET
AHAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQPQLEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQL
LTCAFAAEVLEGIPLAQLPALVARQLAGIP

Sequences:

>Translated_430_residues
MSATLPKPFAPESRLFLEHILGQIPERQDPYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDA
ATLEPWLWPETSYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQE
VPSPLHLLFITVAPEGEAVLAQPRCLLSLQAHSSLTLIEDHVSLGSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHI
NQTAVRQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLVHQAPHGSSRQLHKCIVDET
AHAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQPQLEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQL
LTCAFAAEVLEGIPLAQLPALVARQLAGIP
>Mature_429_residues
SATLPKPFAPESRLFLEHILGQIPERQDPYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAA
TLEPWLWPETSYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQEV
PSPLHLLFITVAPEGEAVLAQPRCLLSLQAHSSLTLIEDHVSLGSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHIN
QTAVRQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLVHQAPHGSSRQLHKCIVDETA
HAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQPQLEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQLL
TCAFAAEVLEGIPLAQLPALVARQLAGIP

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=386, Percent_Identity=34.7150259067358, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI87081955, Length=295, Percent_Identity=23.0508474576271, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46762; Mature: 46630

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATLPKPFAPESRLFLEHILGQIPERQDPYTTLRQQARAQLAELGIPTPREEDWKYSDL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SPLLAHKFRLAAAGDPSLDAATLEPWLWPETSYSRAVFVNGYFAPQLSDLSGLPTALQVI
CHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEE
PLAQAPGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAVL
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEEE
AQPRCLLSLQAHSSLTLIEDHVSLGSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHI
ECCCEEEEEECCCCEEEEHHHHHHCCCCCCCHHHHHHHHHCCCCEEEHHEECCCCCCEEE
NQTAVRQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRL
CHHHHHHCCCCCEEEEEECCCCHHHHCCCEEEECCHHHHHHHHCEEEECCCCCCCHHHHH
VHQAPHGSSRQLHKCIVDETAHAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQPQ
HHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCC
LEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQLLTCAFAAEVLEGIPLAQLPA
EEEEECCEEECCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVARQLAGIP
HHHHHHCCCC
>Mature Secondary Structure 
SATLPKPFAPESRLFLEHILGQIPERQDPYTTLRQQARAQLAELGIPTPREEDWKYSDL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SPLLAHKFRLAAAGDPSLDAATLEPWLWPETSYSRAVFVNGYFAPQLSDLSGLPTALQVI
CHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEE
PLAQAPGELLQTLAKTDVFTALNTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAVL
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEEE
AQPRCLLSLQAHSSLTLIEDHVSLGSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHI
ECCCEEEEEECCCCEEEEHHHHHHCCCCCCCHHHHHHHHHCCCCEEEHHEECCCCCCEEE
NQTAVRQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRL
CHHHHHHCCCCCEEEEEECCCCHHHHCCCEEEECCHHHHHHHHCEEEECCCCCCCHHHHH
VHQAPHGSSRQLHKCIVDETAHAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQPQ
HHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCC
LEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQLLTCAFAAEVLEGIPLAQLPA
EEEEECCEEECCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVARQLAGIP
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]