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The map label for this gene is sufC [C]

Identifier: 86608872

GI number: 86608872

Start: 1471670

End: 1472485

Strand: Reverse

Name: sufC [C]

Synonym: CYB_1403

Alternate gene names: 86608872

Gene position: 1472485-1471670 (Counterclockwise)

Preceding gene: 86608873

Following gene: 86608871

Centisome position: 48.33

GC content: 56.13

Gene sequence:

>816_bases
ATGATCCGTGAAAACAGCCCTGTCATCTTATCCGTTCGAGATCTCAGCGCCGAGATCGATGGCACCCCCATTCTCAAGGG
GTTGAGCCTGGAAATTCGCGCCGGAGAAATCCACGCCATCATGGGCCCCAATGGTTCTGGAAAAAGCACTTTTTCCAAGA
TCTTGGCTGGCCACCCCGACTACCGGGTGACAGGAGGCGAGATCCTCTATCTGGGCAAGAATCTTCTGGAAATGGAACCG
GAGGAGCGGGCTTGGGCAGGGATCTTCTTGGCGTTTCAATACCCCATCGAGGTTCCGGGGGTGAGCAACTTGGATTTCCT
GCGCGCCGCCTACAACGCTCGCCAGAAATATCGGGATCAGCCGGAACTGGATGCTCTGGATTTTGACGACCTGGTACGGG
AAAAGTTGGATATTGTCAAAATGGATCCCGTTTTTTTGGAGCGCTCTGTGAACGAGGGCTTTTCCGGCGGTGAGAAAAAG
CGCAACGAGATCCTGCAAATGGCGGTGTTGGAGCCCACGCTGGCCATTTTGGACGAGACGGATTCCGGCCTGGATATCGA
CGCGCTGCGCATTGTCGCCCAGGGCATCAACCGACTGGCCGGCTCTGAGAATGCCATGCTCTTGATCACCCACTACCAAC
GCTTGCTGGACTATGTTACCCCCGACTACGTGCACGTGATGGAGGGGGGTCGTATCGTCATCAGTGGGGACAAGACCTTG
GCGCTGGAGCTGGAAGAACGGGGCTACGACTGGATCAAAACTCAGTCGGGTCAAGAACCGGCAGCTGCGACATCTCGGCA
GGAGAAAGAGGGATGA

Upstream 100 bases:

>100_bases
TAGAGCTATAGGGGATCCTTAGGCCCAAAATCCAAACCTGGTTTAGGGATCCCTTAACTTTTCAGCTCCTGCCCTTCGGT
GTCAACCCTAGAGTCTAGCC

Downstream 100 bases:

>100_bases
GCGCCACCTTGCCCAAACCTTTTGCCCCAGAGAGCCGCCTATTCCTGGAGCACATCCTCGGCCAAATCCCGGAAAGGCAG
GATCCCTACACCACCCTTAG

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIRENSPVILSVRDLSAEIDGTPILKGLSLEIRAGEIHAIMGPNGSGKSTFSKILAGHPDYRVTGGEILYLGKNLLEMEP
EERAWAGIFLAFQYPIEVPGVSNLDFLRAAYNARQKYRDQPELDALDFDDLVREKLDIVKMDPVFLERSVNEGFSGGEKK
RNEILQMAVLEPTLAILDETDSGLDIDALRIVAQGINRLAGSENAMLLITHYQRLLDYVTPDYVHVMEGGRIVISGDKTL
ALELEERGYDWIKTQSGQEPAAATSRQEKEG

Sequences:

>Translated_271_residues
MIRENSPVILSVRDLSAEIDGTPILKGLSLEIRAGEIHAIMGPNGSGKSTFSKILAGHPDYRVTGGEILYLGKNLLEMEP
EERAWAGIFLAFQYPIEVPGVSNLDFLRAAYNARQKYRDQPELDALDFDDLVREKLDIVKMDPVFLERSVNEGFSGGEKK
RNEILQMAVLEPTLAILDETDSGLDIDALRIVAQGINRLAGSENAMLLITHYQRLLDYVTPDYVHVMEGGRIVISGDKTL
ALELEERGYDWIKTQSGQEPAAATSRQEKEG
>Mature_271_residues
MIRENSPVILSVRDLSAEIDGTPILKGLSLEIRAGEIHAIMGPNGSGKSTFSKILAGHPDYRVTGGEILYLGKNLLEMEP
EERAWAGIFLAFQYPIEVPGVSNLDFLRAAYNARQKYRDQPELDALDFDDLVREKLDIVKMDPVFLERSVNEGFSGGEKK
RNEILQMAVLEPTLAILDETDSGLDIDALRIVAQGINRLAGSENAMLLITHYQRLLDYVTPDYVHVMEGGRIVISGDKTL
ALELEERGYDWIKTQSGQEPAAATSRQEKEG

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9665248, Length=239, Percent_Identity=28.8702928870293, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=59.919028340081, Blast_Score=310, Evalue=6e-86,
Organism=Escherichia coli, GI1787500, Length=212, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082267, Length=225, Percent_Identity=29.3333333333333, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786345, Length=236, Percent_Identity=25.8474576271186, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787712, Length=206, Percent_Identity=27.1844660194175, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=29.1479820627803, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787792, Length=235, Percent_Identity=24.6808510638298, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 30103; Mature: 30103

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRENSPVILSVRDLSAEIDGTPILKGLSLEIRAGEIHAIMGPNGSGKSTFSKILAGHPD
CCCCCCCEEEEEECCCCCCCCCCEEECCEEEEECCEEEEEECCCCCCHHHHHHHHCCCCC
YRVTGGEILYLGKNLLEMEPEERAWAGIFLAFQYPIEVPGVSNLDFLRAAYNARQKYRDQ
EEECCCEEEEECCHHHHCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
PELDALDFDDLVREKLDIVKMDPVFLERSVNEGFSGGEKKRNEILQMAVLEPTLAILDET
CCCCCCCHHHHHHHHHCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
DSGLDIDALRIVAQGINRLAGSENAMLLITHYQRLLDYVTPDYVHVMEGGRIVISGDKTL
CCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCEE
ALELEERGYDWIKTQSGQEPAAATSRQEKEG
EEEEHHCCCCEEECCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MIRENSPVILSVRDLSAEIDGTPILKGLSLEIRAGEIHAIMGPNGSGKSTFSKILAGHPD
CCCCCCCEEEEEECCCCCCCCCCEEECCEEEEECCEEEEEECCCCCCHHHHHHHHCCCCC
YRVTGGEILYLGKNLLEMEPEERAWAGIFLAFQYPIEVPGVSNLDFLRAAYNARQKYRDQ
EEECCCEEEEECCHHHHCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
PELDALDFDDLVREKLDIVKMDPVFLERSVNEGFSGGEKKRNEILQMAVLEPTLAILDET
CCCCCCCHHHHHHHHHCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
DSGLDIDALRIVAQGINRLAGSENAMLLITHYQRLLDYVTPDYVHVMEGGRIVISGDKTL
CCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCEE
ALELEERGYDWIKTQSGQEPAAATSRQEKEG
EEEEHHCCCCEEECCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]