Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is ancA [H]

Identifier: 86608870

GI number: 86608870

Start: 1468881

End: 1470101

Strand: Reverse

Name: ancA [H]

Synonym: CYB_1401

Alternate gene names: 86608870

Gene position: 1470101-1468881 (Counterclockwise)

Preceding gene: 86608871

Following gene: 86608868

Centisome position: 48.25

GC content: 60.85

Gene sequence:

>1221_bases
ATGTTTCCCTCTCTTTTAAATCCACGTGCAGCAGGCATACTCCTATCGGGAGCTGTCTTGGGCATCCACTGCCAGGTGGC
CATGGCCGCCCCTTTTCGCGACACCTTTGGCCACTGGGCCCAAGCCTACATTGAGACCCTCTCCGCTCAGGGCGTGTTGA
ACGGCTTCCCCGATGGTACCTTCCGCCCCAATGAGCCGGTTACCCGCGCTCAGTTTGCCACCATTGTCAATACCGCTTTC
CGCCTCCGCAATACCTCCGGTACTTTTATCGGCTTTCGGGATGTGCCCCCCACCCACTGGGCAGCCAGTGCCATCTCGAC
GGCAGCGGCCAACAACTTAGTCGCAGGCTTTCCTGATGGCACCTTCCGTCCTGAACAGCCCGTTACCCGCACCGAAGCGC
TGGTGGTTTTGACCAACGCCATTGGCAACACGGGAGCGATCCCAGCCGCTCAGCCCAGCGATCTCTTCAGCCGCTATCGA
GATGCGGCAGCCATCCCCAATTGGGCCCTGGCACAACTTGCGGCAGCCAACCGCGCCGGGTTGATTGTCAATTATCCAGA
CCCGATGCTCTTGGAACCCAACCGCCCCGCCACCCGTGCCGAGGTGGCAGCCTTCACCCACCAGGCCATGCTCAGCCGGG
GATCCTTGGTGGCACAAAACCCAGGGGGCTTGCCCTCCGGTTCCCAGCCAGGCTTTGACCTGCGCCTTTCCACCCTAGCG
GCGGGCACCCTGATGCAAACCACCACCCCCTTCAACGAGCGCCTCTTCATTGCCCCCAACGAAACCCGGCCCATGTCTTT
GATCGTCCGCAACCCGATTCGCAACGCCCAGGGGGATATTCTGGTGCCTTTTGGCTCGCGGGTGGATGGCCGCTTTGAGC
CAGCCCCAGGGGGCACCCGTTTTGTGGCGGAAAGCATCATTGTCAACAACCAACTGTTCCCCTTGGCTGCCCAGTCAGAC
ATCATCCACGATGTCAAGGATCCCCGCTACACCACCACAGGCAAAATCATTCAGGATGCGGCCATCGGTGCAGCAGCAGG
CGCTATTCTCGGCTTGGTAACCGGAGACAATGCCATTGCCACAGAGGAAGTGCTGGGGGCAGGGGTGGCCGGAGCGGTAA
TTGGCAATGTAACGGCACCACAGGTGGTGGTGCTGGATCCCAATCAGGTGATCGAGCTGCGCCTCACTCAGGATCTGGCG
CTGACCCCAGCATCCCGATAA

Upstream 100 bases:

>100_bases
AGAGCAAGGGTTTTAGCCATTGTCATCACTGAGGAAATAGCCAGAATAAAAGTAGCCATCGACCCAGCAATGGGCGCTAC
GACAACTCGGTGAACGAACG

Downstream 100 bases:

>100_bases
AAGCGGTGCTGGCATAGCTATCTTCCCAGCCAATCCAAAAGGGTTGTTCCCCCCAACCACAGGCCGATCAAAATGGAAGT
GGTCAGCAGTCCTCCTGCTA

Product: S-layer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MFPSLLNPRAAGILLSGAVLGIHCQVAMAAPFRDTFGHWAQAYIETLSAQGVLNGFPDGTFRPNEPVTRAQFATIVNTAF
RLRNTSGTFIGFRDVPPTHWAASAISTAAANNLVAGFPDGTFRPEQPVTRTEALVVLTNAIGNTGAIPAAQPSDLFSRYR
DAAAIPNWALAQLAAANRAGLIVNYPDPMLLEPNRPATRAEVAAFTHQAMLSRGSLVAQNPGGLPSGSQPGFDLRLSTLA
AGTLMQTTTPFNERLFIAPNETRPMSLIVRNPIRNAQGDILVPFGSRVDGRFEPAPGGTRFVAESIIVNNQLFPLAAQSD
IIHDVKDPRYTTTGKIIQDAAIGAAAGAILGLVTGDNAIATEEVLGAGVAGAVIGNVTAPQVVVLDPNQVIELRLTQDLA
LTPASR

Sequences:

>Translated_406_residues
MFPSLLNPRAAGILLSGAVLGIHCQVAMAAPFRDTFGHWAQAYIETLSAQGVLNGFPDGTFRPNEPVTRAQFATIVNTAF
RLRNTSGTFIGFRDVPPTHWAASAISTAAANNLVAGFPDGTFRPEQPVTRTEALVVLTNAIGNTGAIPAAQPSDLFSRYR
DAAAIPNWALAQLAAANRAGLIVNYPDPMLLEPNRPATRAEVAAFTHQAMLSRGSLVAQNPGGLPSGSQPGFDLRLSTLA
AGTLMQTTTPFNERLFIAPNETRPMSLIVRNPIRNAQGDILVPFGSRVDGRFEPAPGGTRFVAESIIVNNQLFPLAAQSD
IIHDVKDPRYTTTGKIIQDAAIGAAAGAILGLVTGDNAIATEEVLGAGVAGAVIGNVTAPQVVVLDPNQVIELRLTQDLA
LTPASR
>Mature_406_residues
MFPSLLNPRAAGILLSGAVLGIHCQVAMAAPFRDTFGHWAQAYIETLSAQGVLNGFPDGTFRPNEPVTRAQFATIVNTAF
RLRNTSGTFIGFRDVPPTHWAASAISTAAANNLVAGFPDGTFRPEQPVTRTEALVVLTNAIGNTGAIPAAQPSDLFSRYR
DAAAIPNWALAQLAAANRAGLIVNYPDPMLLEPNRPATRAEVAAFTHQAMLSRGSLVAQNPGGLPSGSQPGFDLRLSTLA
AGTLMQTTTPFNERLFIAPNETRPMSLIVRNPIRNAQGDILVPFGSRVDGRFEPAPGGTRFVAESIIVNNQLFPLAAQSD
IIHDVKDPRYTTTGKIIQDAAIGAAAGAILGLVTGDNAIATEEVLGAGVAGAVIGNVTAPQVVVLDPNQVIELRLTQDLA
LTPASR

Specific function: Anchors the cellulosome to the cell surface by binding the duplicated segment that is present at the C-terminal end of CipA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR002102
- InterPro:   IPR018452
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 42707; Mature: 42707

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPSLLNPRAAGILLSGAVLGIHCQVAMAAPFRDTFGHWAQAYIETLSAQGVLNGFPDGT
CCCCCCCCCCCCEEEECEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FRPNEPVTRAQFATIVNTAFRLRNTSGTFIGFRDVPPTHWAASAISTAAANNLVAGFPDG
CCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEECCCC
TFRPEQPVTRTEALVVLTNAIGNTGAIPAAQPSDLFSRYRDAAAIPNWALAQLAAANRAG
CCCCCCCCCHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
LIVNYPDPMLLEPNRPATRAEVAAFTHQAMLSRGSLVAQNPGGLPSGSQPGFDLRLSTLA
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEHHHH
AGTLMQTTTPFNERLFIAPNETRPMSLIVRNPIRNAQGDILVPFGSRVDGRFEPAPGGTR
CCHHEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEECCCCCCHH
FVAESIIVNNQLFPLAAQSDIIHDVKDPRYTTTGKIIQDAAIGAAAGAILGLVTGDNAIA
HHHHHHHCCCCCCCEECCCHHHHHCCCCCEECCCHHHHHHHHHHHHCEEEEEEECCCCHH
TEEVLGAGVAGAVIGNVTAPQVVVLDPNQVIELRLTQDLALTPASR
HHHHHCCCHHHHHHCCCCCCEEEEECCCCEEEEEEECCEECCCCCC
>Mature Secondary Structure
MFPSLLNPRAAGILLSGAVLGIHCQVAMAAPFRDTFGHWAQAYIETLSAQGVLNGFPDGT
CCCCCCCCCCCCEEEECEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FRPNEPVTRAQFATIVNTAFRLRNTSGTFIGFRDVPPTHWAASAISTAAANNLVAGFPDG
CCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEECCCC
TFRPEQPVTRTEALVVLTNAIGNTGAIPAAQPSDLFSRYRDAAAIPNWALAQLAAANRAG
CCCCCCCCCHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
LIVNYPDPMLLEPNRPATRAEVAAFTHQAMLSRGSLVAQNPGGLPSGSQPGFDLRLSTLA
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEHHHH
AGTLMQTTTPFNERLFIAPNETRPMSLIVRNPIRNAQGDILVPFGSRVDGRFEPAPGGTR
CCHHEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEECCCCCCHH
FVAESIIVNNQLFPLAAQSDIIHDVKDPRYTTTGKIIQDAAIGAAAGAILGLVTGDNAIA
HHHHHHHCCCCCCCEECCCHHHHHCCCCCEECCCHHHHHHHHHHHHCEEEEEEECCCCHH
TEEVLGAGVAGAVIGNVTAPQVVVLDPNQVIELRLTQDLALTPASR
HHHHHCCCHHHHHHCCCCCCEEEEECCCCEEEEEEECCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458832 [H]