| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608863
Identifier: 86608863
GI number: 86608863
Start: 1466542
End: 1466985
Strand: Reverse
Name: 86608863
Synonym: CYB_1394
Alternate gene names: NA
Gene position: 1466985-1466542 (Counterclockwise)
Preceding gene: 86608865
Following gene: 86608862
Centisome position: 48.15
GC content: 50.45
Gene sequence:
>444_bases GTGGTCAGGCAGCTACAGCCACCGCCTCGGTTGTCTGTCAAAGAGCTGCAGAAAGCGATTTACAACCACTTTGGCGTTAA AAACGCAGCCGAGCTGAGAAAGTCAGCCAGCTTCAAACTGGCAACCAGCGGCATGGGCAAGCTGAGCTTATCCAACATAG ACGATTTGGAGCGCATTTATCGTCAGCACATCGGGATCCTTCCCAACGAAGAGGGGGAAGAGGGGTATGGCTGCATCAAC GGGATCAACATCTTCAAGTACGACTTGCCATGGCGGGTTTTTGGACTTGACCCCGATCGAGCTACCAATGAGGACATCAA AGCTGCCTTTTATCGCCTGAGCAAGATCTACCATCCCGATTCTCCAACCGGGGATGACAAAATTTTCCAGCGATTGACTC TCTTCTACAAAAGCCTTACGGAGAAATTTGAGCAATGGCTATAG
Upstream 100 bases:
>100_bases GACCAAGCCCGATCCGCAAGGGGCGATTGCTGCAGAAATCCAGCGCCTTTCCGATACCTACGGCATCTCTAAGGAACTCC TGGAGAATTTTGCGCGGTTT
Downstream 100 bases:
>100_bases TCTATGTTTCTTCAAACAAGCTCGCCGAATTTTTGGGTATCAGCCTTGAGGAACTCAGGGAGATTGAAGCCTACTTTGAC AGTATCCCTGATGATGAGTG
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: DNAJ Domain Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIYRQHIGILPNEEGEEGYGCIN GINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPDSPTGDDKIFQRLTLFYKSLTEKFEQWL
Sequences:
>Translated_147_residues MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIYRQHIGILPNEEGEEGYGCIN GINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPDSPTGDDKIFQRLTLFYKSLTEKFEQWL >Mature_147_residues MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIYRQHIGILPNEEGEEGYGCIN GINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPDSPTGDDKIFQRLTLFYKSLTEKFEQWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16983; Mature: 16983
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIY CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHH RQHIGILPNEEGEEGYGCINGINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPD HHHCCCCCCCCCCCCCCEECCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC SPTGDDKIFQRLTLFYKSLTEKFEQWL CCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIY CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHH RQHIGILPNEEGEEGYGCINGINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPD HHHCCCCCCCCCCCCCCEECCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC SPTGDDKIFQRLTLFYKSLTEKFEQWL CCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA