| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608862
Identifier: 86608862
GI number: 86608862
Start: 1465526
End: 1466551
Strand: Reverse
Name: 86608862
Synonym: CYB_1393
Alternate gene names: NA
Gene position: 1466551-1465526 (Counterclockwise)
Preceding gene: 86608863
Following gene: 86608856
Centisome position: 48.14
GC content: 44.74
Gene sequence:
>1026_bases ATGGCTATAGTCTATGTTTCTTCAAACAAGCTCGCCGAATTTTTGGGTATCAGCCTTGAGGAACTCAGGGAGATTGAAGC CTACTTTGACAGTATCCCTGATGATGAGTGGGAACTGGTGGAAGGTAAAGACTATCGCGTTATCAACAAAAGTTCGGGGC TGAGAGAATACACGCAGTCTGGTGCTTACGCCATTTTATCCTTTTTAAGGTCTAGGTCAGAGCAAGGTCGTAAGTACTCT ACAGACACAAGCATTAGCACAAGCATTAGGAATTGGTTCAAGGAAGAGTATCGCAAGAGGCAGAAGGCTCTGGTGGATCA TAGGATCCTCGAAAACAGCTCCTCTCTGGTCAGAAGACAAGATCAGTTTTGGCTATCTCTTCAAGATGTTGTGACGATCT TTGGAACTCGAACTGATTACCTTAAGAAAGCGCTTGAGATTGCATCAAAACAAAGTAAACTCATCAAAGACGTTCATTAC ACACGCTTTGGCAACGACGACACTGTCTACCTCTCTTTGCGAGGCATCTATGAGCTTGCCAAGATTATGGTAGAAGTCCT CAAGCAAAACCACAGAAAAGACTGGTGTCGAGATGTTGGCGAACGCATTGAACCCCAGATTCAGGCAATCGTCAAGACAA TCCAGGATAGACAAAGGCAGATAGAAAGAGCAAAAGAGCTTGCAAGAAGAAGGGATAAAAATCTCTGTAGAGTTACTCGA AAAACAGCCAGTAGCCTAACGGTTCACCATCTCTACTCTGAAGCGCACTATCCAAAGATTGCAGCAAATCTTTCCAACCT GATTACTATAGCCAGCGAAGTGCATAGCCACTTTCATCAGTGGATGGGAGGTTTCAACGAGCCATGTACAATTGATGACT TCATCAAGTATGTTTTGGAATACTATCCTGAGAACAAAAACCTGATCATCTGGTTGGGACAACAGAAGGCCAGTCTTGGG CCGCAGTTGCCCATTGGCAAGGGGAGAGAGCATGTGCTCTACATTCCTCTCCAGCGTGTAACTTGA
Upstream 100 bases:
>100_bases GCCTGAGCAAGATCTACCATCCCGATTCTCCAACCGGGGATGACAAAATTTTCCAGCGATTGACTCTCTTCTACAAAAGC CTTACGGAGAAATTTGAGCA
Downstream 100 bases:
>100_bases AATAACCCATTGGTTATCGGTTGTTTTCAGGTCATTCCAACCACCTTAGTCAGGTTTGTCCGTCCTTGAGGATCCTTGAT CTCTTTTTGGGGATCCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MAIVYVSSNKLAEFLGISLEELREIEAYFDSIPDDEWELVEGKDYRVINKSSGLREYTQSGAYAILSFLRSRSEQGRKYS TDTSISTSIRNWFKEEYRKRQKALVDHRILENSSSLVRRQDQFWLSLQDVVTIFGTRTDYLKKALEIASKQSKLIKDVHY TRFGNDDTVYLSLRGIYELAKIMVEVLKQNHRKDWCRDVGERIEPQIQAIVKTIQDRQRQIERAKELARRRDKNLCRVTR KTASSLTVHHLYSEAHYPKIAANLSNLITIASEVHSHFHQWMGGFNEPCTIDDFIKYVLEYYPENKNLIIWLGQQKASLG PQLPIGKGREHVLYIPLQRVT
Sequences:
>Translated_341_residues MAIVYVSSNKLAEFLGISLEELREIEAYFDSIPDDEWELVEGKDYRVINKSSGLREYTQSGAYAILSFLRSRSEQGRKYS TDTSISTSIRNWFKEEYRKRQKALVDHRILENSSSLVRRQDQFWLSLQDVVTIFGTRTDYLKKALEIASKQSKLIKDVHY TRFGNDDTVYLSLRGIYELAKIMVEVLKQNHRKDWCRDVGERIEPQIQAIVKTIQDRQRQIERAKELARRRDKNLCRVTR KTASSLTVHHLYSEAHYPKIAANLSNLITIASEVHSHFHQWMGGFNEPCTIDDFIKYVLEYYPENKNLIIWLGQQKASLG PQLPIGKGREHVLYIPLQRVT >Mature_340_residues AIVYVSSNKLAEFLGISLEELREIEAYFDSIPDDEWELVEGKDYRVINKSSGLREYTQSGAYAILSFLRSRSEQGRKYST DTSISTSIRNWFKEEYRKRQKALVDHRILENSSSLVRRQDQFWLSLQDVVTIFGTRTDYLKKALEIASKQSKLIKDVHYT RFGNDDTVYLSLRGIYELAKIMVEVLKQNHRKDWCRDVGERIEPQIQAIVKTIQDRQRQIERAKELARRRDKNLCRVTRK TASSLTVHHLYSEAHYPKIAANLSNLITIASEVHSHFHQWMGGFNEPCTIDDFIKYVLEYYPENKNLIIWLGQQKASLGP QLPIGKGREHVLYIPLQRVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39863; Mature: 39732
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVYVSSNKLAEFLGISLEELREIEAYFDSIPDDEWELVEGKDYRVINKSSGLREYTQS CEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCCHHHHHHC GAYAILSFLRSRSEQGRKYSTDTSISTSIRNWFKEEYRKRQKALVDHRILENSSSLVRRQ CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DQFWLSLQDVVTIFGTRTDYLKKALEIASKQSKLIKDVHYTRFGNDDTVYLSLRGIYELA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH KIMVEVLKQNHRKDWCRDVGERIEPQIQAIVKTIQDRQRQIERAKELARRRDKNLCRVTR HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTASSLTVHHLYSEAHYPKIAANLSNLITIASEVHSHFHQWMGGFNEPCTIDDFIKYVLE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH YYPENKNLIIWLGQQKASLGPQLPIGKGREHVLYIPLQRVT HCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECHHCC >Mature Secondary Structure AIVYVSSNKLAEFLGISLEELREIEAYFDSIPDDEWELVEGKDYRVINKSSGLREYTQS EEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCCHHHHHHC GAYAILSFLRSRSEQGRKYSTDTSISTSIRNWFKEEYRKRQKALVDHRILENSSSLVRRQ CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DQFWLSLQDVVTIFGTRTDYLKKALEIASKQSKLIKDVHYTRFGNDDTVYLSLRGIYELA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH KIMVEVLKQNHRKDWCRDVGERIEPQIQAIVKTIQDRQRQIERAKELARRRDKNLCRVTR HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTASSLTVHHLYSEAHYPKIAANLSNLITIASEVHSHFHQWMGGFNEPCTIDDFIKYVLE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH YYPENKNLIIWLGQQKASLGPQLPIGKGREHVLYIPLQRVT HCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA