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The map label for this gene is rbsA [H]

Identifier: 86608865

GI number: 86608865

Start: 1467236

End: 1467478

Strand: Reverse

Name: rbsA [H]

Synonym: CYB_1396

Alternate gene names: 86608865

Gene position: 1467478-1467236 (Counterclockwise)

Preceding gene: 86608866

Following gene: 86608863

Centisome position: 48.17

GC content: 59.67

Gene sequence:

>243_bases
GTGGACTTTGAACTACGGGCCGGGGAGATTTACGCTCTCCGGGGGGAGAATGGCGCCGGGAAAACCACCCTGATGAACAT
GCTGGCGGGCCTCTACCAGCCGGATGCTGGCGAGATTCGCCTGCGGGGCCGCCCAGTGCGGATCTGCTCCCCACACCAAG
CCATCCAACTGGGCATCGGTATGGCGAAGCTTATGTGGTGCAAAGGCTTTACAGGTACCGGCAACATTGTTACACTGACC
TAA

Upstream 100 bases:

>100_bases
GAGCCTTCCATTTATGATCAGCCTTTTTATGAGAGAGCCTGTCTGGTAGGGATCCTGGCGGGGGAACTCAACCGAACAGG
CAAGCTGGGGGCGCTCTAGC

Downstream 100 bases:

>100_bases
GATTGTCTGCATCATTGTGCAAATAAATTCACAGACAGCCTATAAGTTTTGTGCGGATCTACACTTGGCATCACTGACTT
GAGGGGAAGCCATGCCCAAA

Product: carbohydrate ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDFELRAGEIYALRGENGAGKTTLMNMLAGLYQPDAGEIRLRGRPVRICSPHQAIQLGIGMAKLMWCKGFTGTGNIVTLT

Sequences:

>Translated_80_residues
MDFELRAGEIYALRGENGAGKTTLMNMLAGLYQPDAGEIRLRGRPVRICSPHQAIQLGIGMAKLMWCKGFTGTGNIVTLT
>Mature_80_residues
MDFELRAGEIYALRGENGAGKTTLMNMLAGLYQPDAGEIRLRGRPVRICSPHQAIQLGIGMAKLMWCKGFTGTGNIVTLT

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]

COG id: COG3845

COG function: function code R; ABC-type uncharacterized transport systems, ATPase components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI48995001, Length=60, Percent_Identity=53.3333333333333, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 8682; Mature: 8682

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFELRAGEIYALRGENGAGKTTLMNMLAGLYQPDAGEIRLRGRPVRICSPHQAIQLGIG
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCEEEECCC
MAKLMWCKGFTGTGNIVTLT
CEEHEEECCCCCCCCEEEEC
>Mature Secondary Structure
MDFELRAGEIYALRGENGAGKTTLMNMLAGLYQPDAGEIRLRGRPVRICSPHQAIQLGIG
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCEEEECCC
MAKLMWCKGFTGTGNIVTLT
CEEHEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA