| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608262
Identifier: 86608262
GI number: 86608262
Start: 800977
End: 802446
Strand: Reverse
Name: 86608262
Synonym: CYB_0778
Alternate gene names: NA
Gene position: 802446-800977 (Counterclockwise)
Preceding gene: 86608263
Following gene: 86608261
Centisome position: 26.34
GC content: 62.18
Gene sequence:
>1470_bases ATGGGCCAGGAGATCACCTGCCTCCGTTTTGGTACTGCAGACTTTGCTCAGTTTGCAGCTCGGCTCCAGCAAGAGACGAA GTTGCTCGAGCGCTGGTTGGCCAGTGCGCCGGGGCTGGATCCGGCTTGTCAGCCCTTTGCCCAGGGATCCCCGGTGGGCG GGTTTGAGCTGGAGGCATGGCTGGTGACCCCTCAGGGGGATCCGGCCCCGATCAACTCAGCCTACCTGGAAGCGGTGAAC GATCCGCTGGTGGTGCCGGAACTGGCCCAGTTCAACGTGGAGATCAACAGCCGGCCCCAAGTTTTGACCGGCTTGGCTCT GCGGCAGTTTCAGCAAGAGCTGGGCCAAACGTGGGATCGCTGCTGCCAGGTGGCCGAACACTTGCAGGTGGGGCTGATGA TGATCGGGATTTTGCCCACGGTGCAGCAAAAGCAACTGACCTTGGAGATGATCTCCCCCCGCAAGCGTTACCTGGCCCTC AATGAGCAAATCCTGAACTTGCACCGGCGCGAGCAATCCCAAGCGATCCCTTCCCTGGGGCTAGATATCGAAGGACCGGC TGGGCGGTTGCGGGTTACCCACCCGGACATCATGCTGGAGGCGGCGACCACCTCCTTTCAAATCCATCTGCAGGTGGCCC CCCACCAGGCAGCCCGCTACTTCAACGCTTCCCTGCTCGTGTCAGCCCCTTTGGTGGCGCTGGCGGCCAATTCCCCCTAC CTGTTCGGGCACGATCTGTGGGCAGAAACCCGCATCCCTTTGTTTGAGCAAGCTTTGGATGGGCCACCCCCGCCCTCCCC CACCCACTGCCCCCGCGTCACCTTCGGGCAAGGCTATGTACAGGGATCCCTAATGGAGCTGTTCTGGGAAAACCTGCATC GCTACCCGGTGGTATTGCCACAAAGGTTAGCCACTTCCCCATCAGAGCTGGCCCATCTGCGCCTCCACAACGGCACCATC TGGCGCTGGAACCGACCCCTGATCGGCTTGGATCCGGTTCCCCACTTGCGCATCGAACAGCGGGTGGCGGCGGCAGGCCC AACCCTACCCGATATGATCGCCAATGCGGCCTTCTACTTTGGTCTGGTGCAAGCCTTGGGATCCCAGCCCGTCCCCCCCG AGCAGGAGCTGAGCTTTGCCCAGTGCCGCGCCAATTTCTACACGGCGGCCCGCTGGGGTCTGGAGGCCCCCATCACTTGG CTCAAGGGTTGGCAGGGATCCCTGCGCCAATTGCTGCTGGAAGAGCTGATCCCCCAAGCAGAGGCGGGTTTGGTTCAACT GGATCTGGCCCCCTCCGATATTCAGGAGTACCTGGGCATTCTCCGCGCCCGGGTGGAGTCGGGGCAGAATGGGGCCACCT GGCAGCGCCGCTATGTCGCCCGGCATGGTAAAGATATGCAACAATTAACCTGTGCCTACTGGGAACGGCAGCGGCAAGGC CAACCGGTACACACCTGGGATCTCAGCTAG
Upstream 100 bases:
>100_bases TTGAAGATGTATCCATCACTGCGGGCTAAGTAAAGCTAGGGGTGTCGAGATCCCGGCAACAGCGATTAACCTCATTCCCA AAAGCTGCGGAGTTGTTCCC
Downstream 100 bases:
>100_bases GGCTCTCTCCACAGCCGGTTGTACCAGCGGTGGGCCACCGCGGCGGCAGGACGGATCCCTGGCCCGCATCTCGAGTGGGC AAACTCTCTCTCAGATGGCC
Product: glutamate-cysteine ligase family 2 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MGQEITCLRFGTADFAQFAARLQQETKLLERWLASAPGLDPACQPFAQGSPVGGFELEAWLVTPQGDPAPINSAYLEAVN DPLVVPELAQFNVEINSRPQVLTGLALRQFQQELGQTWDRCCQVAEHLQVGLMMIGILPTVQQKQLTLEMISPRKRYLAL NEQILNLHRREQSQAIPSLGLDIEGPAGRLRVTHPDIMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY LFGHDLWAETRIPLFEQALDGPPPPSPTHCPRVTFGQGYVQGSLMELFWENLHRYPVVLPQRLATSPSELAHLRLHNGTI WRWNRPLIGLDPVPHLRIEQRVAAAGPTLPDMIANAAFYFGLVQALGSQPVPPEQELSFAQCRANFYTAARWGLEAPITW LKGWQGSLRQLLLEELIPQAEAGLVQLDLAPSDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG QPVHTWDLS
Sequences:
>Translated_489_residues MGQEITCLRFGTADFAQFAARLQQETKLLERWLASAPGLDPACQPFAQGSPVGGFELEAWLVTPQGDPAPINSAYLEAVN DPLVVPELAQFNVEINSRPQVLTGLALRQFQQELGQTWDRCCQVAEHLQVGLMMIGILPTVQQKQLTLEMISPRKRYLAL NEQILNLHRREQSQAIPSLGLDIEGPAGRLRVTHPDIMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY LFGHDLWAETRIPLFEQALDGPPPPSPTHCPRVTFGQGYVQGSLMELFWENLHRYPVVLPQRLATSPSELAHLRLHNGTI WRWNRPLIGLDPVPHLRIEQRVAAAGPTLPDMIANAAFYFGLVQALGSQPVPPEQELSFAQCRANFYTAARWGLEAPITW LKGWQGSLRQLLLEELIPQAEAGLVQLDLAPSDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG QPVHTWDLS >Mature_488_residues GQEITCLRFGTADFAQFAARLQQETKLLERWLASAPGLDPACQPFAQGSPVGGFELEAWLVTPQGDPAPINSAYLEAVND PLVVPELAQFNVEINSRPQVLTGLALRQFQQELGQTWDRCCQVAEHLQVGLMMIGILPTVQQKQLTLEMISPRKRYLALN EQILNLHRREQSQAIPSLGLDIEGPAGRLRVTHPDIMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPYL FGHDLWAETRIPLFEQALDGPPPPSPTHCPRVTFGQGYVQGSLMELFWENLHRYPVVLPQRLATSPSELAHLRLHNGTIW RWNRPLIGLDPVPHLRIEQRVAAAGPTLPDMIANAAFYFGLVQALGSQPVPPEQELSFAQCRANFYTAARWGLEAPITWL KGWQGSLRQLLLEELIPQAEAGLVQLDLAPSDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQGQ PVHTWDLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54647; Mature: 54516
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQEITCLRFGTADFAQFAARLQQETKLLERWLASAPGLDPACQPFAQGSPVGGFELEAW CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE LVTPQGDPAPINSAYLEAVNDPLVVPELAQFNVEINSRPQVLTGLALRQFQQELGQTWDR EECCCCCCCCCCHHHHHHCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHH CCQVAEHLQVGLMMIGILPTVQQKQLTLEMISPRKRYLALNEQILNLHRREQSQAIPSLG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LDIEGPAGRLRVTHPDIMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY CCCCCCCCCEEEECCCEEEEEECCEEEEEEEECCHHHHHHHCCHHHHHCCCCEEECCCCE LFGHDLWAETRIPLFEQALDGPPPPSPTHCPRVTFGQGYVQGSLMELFWENLHRYPVVLP EEECCHHHCCCCCHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCC QRLATSPSELAHLRLHNGTIWRWNRPLIGLDPVPHLRIEQRVAAAGPTLPDMIANAAFYF HHHCCCHHHHEEEEECCCEEEEECCCEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH GLVQALGSQPVPPEQELSFAQCRANFYTAARWGLEAPITWLKGWQGSLRQLLLEELIPQA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCHH EAGLVQLDLAPSDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG HCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC QPVHTWDLS CCCEECCCC >Mature Secondary Structure GQEITCLRFGTADFAQFAARLQQETKLLERWLASAPGLDPACQPFAQGSPVGGFELEAW CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE LVTPQGDPAPINSAYLEAVNDPLVVPELAQFNVEINSRPQVLTGLALRQFQQELGQTWDR EECCCCCCCCCCHHHHHHCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHH CCQVAEHLQVGLMMIGILPTVQQKQLTLEMISPRKRYLALNEQILNLHRREQSQAIPSLG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LDIEGPAGRLRVTHPDIMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY CCCCCCCCCEEEECCCEEEEEECCEEEEEEEECCHHHHHHHCCHHHHHCCCCEEECCCCE LFGHDLWAETRIPLFEQALDGPPPPSPTHCPRVTFGQGYVQGSLMELFWENLHRYPVVLP EEECCHHHCCCCCHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCC QRLATSPSELAHLRLHNGTIWRWNRPLIGLDPVPHLRIEQRVAAAGPTLPDMIANAAFYF HHHCCCHHHHEEEEECCCEEEEECCCEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH GLVQALGSQPVPPEQELSFAQCRANFYTAARWGLEAPITWLKGWQGSLRQLLLEELIPQA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCHH EAGLVQLDLAPSDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG HCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC QPVHTWDLS CCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA