| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608261
Identifier: 86608261
GI number: 86608261
Start: 799726
End: 800742
Strand: Reverse
Name: 86608261
Synonym: CYB_0777
Alternate gene names: NA
Gene position: 800742-799726 (Counterclockwise)
Preceding gene: 86608262
Following gene: 86608260
Centisome position: 26.28
GC content: 61.65
Gene sequence:
>1017_bases ATGCTCACCGTTCTCGATCATCTACCGGATCAACTGCTGGATCTAGAGGCCCATCAGCTTTACGACCGATTGGGTGGGCC AACCCTCATCCATCTGCCGGGACGACGGGATCCCGCCCTGTTTGTGTCCGTCCTGCTGCACGGCAACGAAACCACCGGCT GGCAGGCGGTGCGACAGCTTCTCCGCCGCTACGCCCAGCGGGAATTGCCCCGTTCTCTTTCCCTTTTCATTGGCAACGTG CAGGCTGCCCGCCACCGGCAACGGCGGCTGGATGGCCAACCGGACTACAACCGCATTTGGGGCCCCGGCTCCACCCCCGA GCACGCTATGGCCCAGGCCGTCCTGCAGCAAATGCAGCAGCGGGGCGTTTTTGCCAGCGTCGATATCCACAACAACACGG GCACCAACCCCCACTACGCCTGTGTCAATCACCTGGATGCCCCTACCCTGCACCTGGCCACCTTGTTTGGGCGCACCGTC CTCTATTTCACCAGGCCAGAAGGGGTACAGAGCATGGCCTTCGGGCGCTTCTGCCCGGCGGTGACCCTGGAATGCGGCAA GCCGGATCAACCCCACGGCACCCAGCATGCCTACGAATTTCTGGAAGCCTGCCTGCACCTGTCGGCGATCCCGCAGCGCC CTGTCTTCCGCCAAGATATCGACCTGTTCCACAGCGTCGCCATTGTCAAAATCCCGGATCAGGTGAGCTTCAGCTTTGGG GAAGAGGATGGCAACCAAGAGGGATCCCCCTCCCACATCCGCTTCCCGCCGGATTTGGATCTCCTCAATTTTCGGGAGCT TCCCCCCCACACCCCCATTGGCTGGACGAACAACGGCTTCCACCTGGAGGTGCAAGACGAGCAGGGCCAAAATGTGGCGG ATCGCTTTTTCTATGCCTGCAACGGAGAAATTCGCACCAGCGTGCCCATCATGCCGGGCATGCTCACCCTCAACAGCCGC ATCATCCGCCAAGACTGCCTCTGCTACCTGATGGAGCGCTACCCCCTGGTGGGCTGA
Upstream 100 bases:
>100_bases CATTCGCGACCAAGGACTTCGTTGGACTTCTGCTCCCTCCTACCCCAGGGAGAGAGGCCAGAAGCCAGAAGTTTGAGTCG AGCCTCTTAGCCCAAACAGT
Downstream 100 bases:
>100_bases GCCGGGCTGCCAATTTCCCCGAGGGGATCCCCAAACCAGAACAGGTGGTGCTCCCCACCCCTGCAATAACAGACTCCCCG CTGGCCGCTGTACCCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLTVLDHLPDQLLDLEAHQLYDRLGGPTLIHLPGRRDPALFVSVLLHGNETTGWQAVRQLLRRYAQRELPRSLSLFIGNV QAARHRQRRLDGQPDYNRIWGPGSTPEHAMAQAVLQQMQQRGVFASVDIHNNTGTNPHYACVNHLDAPTLHLATLFGRTV LYFTRPEGVQSMAFGRFCPAVTLECGKPDQPHGTQHAYEFLEACLHLSAIPQRPVFRQDIDLFHSVAIVKIPDQVSFSFG EEDGNQEGSPSHIRFPPDLDLLNFRELPPHTPIGWTNNGFHLEVQDEQGQNVADRFFYACNGEIRTSVPIMPGMLTLNSR IIRQDCLCYLMERYPLVG
Sequences:
>Translated_338_residues MLTVLDHLPDQLLDLEAHQLYDRLGGPTLIHLPGRRDPALFVSVLLHGNETTGWQAVRQLLRRYAQRELPRSLSLFIGNV QAARHRQRRLDGQPDYNRIWGPGSTPEHAMAQAVLQQMQQRGVFASVDIHNNTGTNPHYACVNHLDAPTLHLATLFGRTV LYFTRPEGVQSMAFGRFCPAVTLECGKPDQPHGTQHAYEFLEACLHLSAIPQRPVFRQDIDLFHSVAIVKIPDQVSFSFG EEDGNQEGSPSHIRFPPDLDLLNFRELPPHTPIGWTNNGFHLEVQDEQGQNVADRFFYACNGEIRTSVPIMPGMLTLNSR IIRQDCLCYLMERYPLVG >Mature_338_residues MLTVLDHLPDQLLDLEAHQLYDRLGGPTLIHLPGRRDPALFVSVLLHGNETTGWQAVRQLLRRYAQRELPRSLSLFIGNV QAARHRQRRLDGQPDYNRIWGPGSTPEHAMAQAVLQQMQQRGVFASVDIHNNTGTNPHYACVNHLDAPTLHLATLFGRTV LYFTRPEGVQSMAFGRFCPAVTLECGKPDQPHGTQHAYEFLEACLHLSAIPQRPVFRQDIDLFHSVAIVKIPDQVSFSFG EEDGNQEGSPSHIRFPPDLDLLNFRELPPHTPIGWTNNGFHLEVQDEQGQNVADRFFYACNGEIRTSVPIMPGMLTLNSR IIRQDCLCYLMERYPLVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38237; Mature: 38237
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVLDHLPDQLLDLEAHQLYDRLGGPTLIHLPGRRDPALFVSVLLHGNETTGWQAVRQL CCCHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHEEEEHHCCCCCCHHHHHHHH LRRYAQRELPRSLSLFIGNVQAARHRQRRLDGQPDYNRIWGPGSTPEHAMAQAVLQQMQQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RGVFASVDIHNNTGTNPHYACVNHLDAPTLHLATLFGRTVLYFTRPEGVQSMAFGRFCPA CCCEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCE VTLECGKPDQPHGTQHAYEFLEACLHLSAIPQRPVFRQDIDLFHSVAIVKIPDQVSFSFG EEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCEEEEECCCHHCCCCC EEDGNQEGSPSHIRFPPDLDLLNFRELPPHTPIGWTNNGFHLEVQDEQGQNVADRFFYAC CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHEEEEE NGEIRTSVPIMPGMLTLNSRIIRQDCLCYLMERYPLVG CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLTVLDHLPDQLLDLEAHQLYDRLGGPTLIHLPGRRDPALFVSVLLHGNETTGWQAVRQL CCCHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHEEEEHHCCCCCCHHHHHHHH LRRYAQRELPRSLSLFIGNVQAARHRQRRLDGQPDYNRIWGPGSTPEHAMAQAVLQQMQQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RGVFASVDIHNNTGTNPHYACVNHLDAPTLHLATLFGRTVLYFTRPEGVQSMAFGRFCPA CCCEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCE VTLECGKPDQPHGTQHAYEFLEACLHLSAIPQRPVFRQDIDLFHSVAIVKIPDQVSFSFG EEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCEEEEECCCHHCCCCC EEDGNQEGSPSHIRFPPDLDLLNFRELPPHTPIGWTNNGFHLEVQDEQGQNVADRFFYAC CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHEEEEE NGEIRTSVPIMPGMLTLNSRIIRQDCLCYLMERYPLVG CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA