Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608168

Identifier: 86608168

GI number: 86608168

Start: 696771

End: 697595

Strand: Reverse

Name: 86608168

Synonym: CYB_0682

Alternate gene names: NA

Gene position: 697595-696771 (Counterclockwise)

Preceding gene: 86608169

Following gene: 86608165

Centisome position: 22.9

GC content: 62.18

Gene sequence:

>825_bases
GTGGGCCTGCTGATTGCAAAACTCAAGGCTTTGCCCTTGCCGCTGCGGCTGTTGCTGTTTTTGGGGATCCCCCTCCTAGC
CTGGCTGCCGTGGGTCGGGCTGGGGGGGTGGTTTTTTCCGGAAGCGCGAGCCTACCTGTGGCTGCCCCTGTATGCCTTGC
TGCTGGTCTGGCTGGGGCTGTGGGGATCTGGATTTGCTGCCTATGGGCTAGATAGCAGTTGGGCCTGTCGGGGCGGGATC
CTCTGGGGCCTGGGGATCGGGGTCGGGGGGCTTTTCTTGCTTTTGGGCCTGGAGGGATCCCTGGGTTGGCTGAGTTGGAG
GGCGGTAGGAGGGGGATCCCTGCTGGTCTATGGGTTGCTGGGGTTGCTTTTGGGCTTGGGGGTGGCGCTGGCGGAGGAGC
TGTTTTTTCGCGGCTGGCTGCTGCAGGAGATGCTGCTGGACTACGGTTGCAGCACTGCGGTGTGGGGATCCAGCTTCCTG
TTTGCTATGGCCCATTTCCTGAAGCCTTTGCCTGAGATTCTCGCCACCTGGCCGCAATTTCCCGGACTGTGGCTGATGGG
GCTGCTGCTGGTGCAGGCGAGGGTCTGGAACCAAAACAAGCTGGGCTTAAGCCTGGGGCTGCACGCGGGTTGGGTATGGG
GCATGGTCTGGGTCAACAACTTGGCCTGGATAGACTACACCGGCAGGGTGCCCGAGTGGCTGACCGGGATCGGCGGCAAC
CCCTTGGCCGGGCTGATGGGCTTGCTTTTTCTAGGAGGGACTTTCGCATTTCTCAACGGCCTGGCTCAAGCTGGCTGGCT
ACCGGCAGACCTGGAAAAGCGTTGA

Upstream 100 bases:

>100_bases
CGTGGTGCCGCGGGAGCACGCGGAGTTTTACTGTGAGCAGTTGCGTCAGCACGGCCTCACCAGCTCCATTGAGCCGGAAC
GCTAAGCAGGAGCGGTTGGG

Downstream 100 bases:

>100_bases
TTGAGCTGATCGATAAAGAATAACCTACTCTCCCCAAGGCCCTTCCTCGTAGTAGGCGGTCACCTGCTCCTTGGGCGGCT
GGGTAAGCAAGCTTACGCCA

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; Abortive Infection Protein Like

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGLLIAKLKALPLPLRLLLFLGIPLLAWLPWVGLGGWFFPEARAYLWLPLYALLLVWLGLWGSGFAAYGLDSSWACRGGI
LWGLGIGVGGLFLLLGLEGSLGWLSWRAVGGGSLLVYGLLGLLLGLGVALAEELFFRGWLLQEMLLDYGCSTAVWGSSFL
FAMAHFLKPLPEILATWPQFPGLWLMGLLLVQARVWNQNKLGLSLGLHAGWVWGMVWVNNLAWIDYTGRVPEWLTGIGGN
PLAGLMGLLFLGGTFAFLNGLAQAGWLPADLEKR

Sequences:

>Translated_274_residues
MGLLIAKLKALPLPLRLLLFLGIPLLAWLPWVGLGGWFFPEARAYLWLPLYALLLVWLGLWGSGFAAYGLDSSWACRGGI
LWGLGIGVGGLFLLLGLEGSLGWLSWRAVGGGSLLVYGLLGLLLGLGVALAEELFFRGWLLQEMLLDYGCSTAVWGSSFL
FAMAHFLKPLPEILATWPQFPGLWLMGLLLVQARVWNQNKLGLSLGLHAGWVWGMVWVNNLAWIDYTGRVPEWLTGIGGN
PLAGLMGLLFLGGTFAFLNGLAQAGWLPADLEKR
>Mature_273_residues
GLLIAKLKALPLPLRLLLFLGIPLLAWLPWVGLGGWFFPEARAYLWLPLYALLLVWLGLWGSGFAAYGLDSSWACRGGIL
WGLGIGVGGLFLLLGLEGSLGWLSWRAVGGGSLLVYGLLGLLLGLGVALAEELFFRGWLLQEMLLDYGCSTAVWGSSFLF
AMAHFLKPLPEILATWPQFPGLWLMGLLLVQARVWNQNKLGLSLGLHAGWVWGMVWVNNLAWIDYTGRVPEWLTGIGGNP
LAGLMGLLFLGGTFAFLNGLAQAGWLPADLEKR

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29859; Mature: 29728

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLIAKLKALPLPLRLLLFLGIPLLAWLPWVGLGGWFFPEARAYLWLPLYALLLVWLGL
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WGSGFAAYGLDSSWACRGGILWGLGIGVGGLFLLLGLEGSLGWLSWRAVGGGSLLVYGLL
HCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
GLLLGLGVALAEELFFRGWLLQEMLLDYGCSTAVWGSSFLFAMAHFLKPLPEILATWPQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGLWLMGLLLVQARVWNQNKLGLSLGLHAGWVWGMVWVNNLAWIDYTGRVPEWLTGIGGN
CHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCEEEEEECCCCHHHHHCCCCC
PLAGLMGLLFLGGTFAFLNGLAQAGWLPADLEKR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GLLIAKLKALPLPLRLLLFLGIPLLAWLPWVGLGGWFFPEARAYLWLPLYALLLVWLGL
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WGSGFAAYGLDSSWACRGGILWGLGIGVGGLFLLLGLEGSLGWLSWRAVGGGSLLVYGLL
HCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
GLLLGLGVALAEELFFRGWLLQEMLLDYGCSTAVWGSSFLFAMAHFLKPLPEILATWPQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGLWLMGLLLVQARVWNQNKLGLSLGLHAGWVWGMVWVNNLAWIDYTGRVPEWLTGIGGN
CHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCEEEEEECCCCHHHHHCCCCC
PLAGLMGLLFLGGTFAFLNGLAQAGWLPADLEKR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA