Click here to switch to the map view.

The map label for this gene is dprA [H]

Identifier: 86608165

GI number: 86608165

Start: 693812

End: 694969

Strand: Reverse

Name: dprA [H]

Synonym: CYB_0678

Alternate gene names: 86608165

Gene position: 694969-693812 (Counterclockwise)

Preceding gene: 86608168

Following gene: 86608155

Centisome position: 22.81

GC content: 63.9

Gene sequence:

>1158_bases
TTGTCTTTTCCCCTTTCCCCTTCAGATCCTGTTGGCAAGAGGGAGCCTTCCCGTGGGCCAGGCCATGAAGAACGGGAGCG
GCCCTACTGGCTAGCTTGGGCCCGCATCAAAGGGATTGGCCCCCACCGGCTCAAGCGGCTGGCGGAGTTTTTTGGATCCC
TGGAGCGGGCTTGGCAAGCGGATGCCCCGGCCCTGCGGCAGGTGGAAGGCATTGGCCCCACCCTGGCCCAGGCTATTGTC
TCTGCCCGTCCTGGCCTTGATCCCGAGCAGATCCTGGAGGAAACCCTCAAAGCGGGGATCCCCTTTCTCACGCCTGCAGA
TCCGGACTATCCGCCGCTGCTGTGGGAGGTGCCAGATCCCCCGCCCATTCTCTATGCCCTAGGAGAATGTCCCAATTGGC
AACAGCCGGCTATTGCCATCGTCGGCACCCGCGCCCCTACGGCCTACGGTCGACAGTGGACCCAGAAAGTCAGCGCTGCC
CTGGCGGAAGCTGGCTGTGTGGTGGTCTCGGGGCTGGCAACGGGGATCGACGGCATTGCCCACCAGGCCTGTCTGGATGC
CGGCGGCAAGACGGTGGCCGTGGTGGGAACGGGGGTGGACAAAGTTTACCCAGCTCACCATCAAGCTCTCTACCGGCGCA
TCCTGGCCCAAGGGGCCATCCTCAGCGAATATCCCCCCGGCACGCCACCGGCCAAGGAGCATTTTCCCCAGCGCAACCGC
ATCATTGCCGGCCTCTGCCGCGCCACTTTGGTGATGGAGGCTCCGGAAACCTCGGGAGCGCTAATTACTGCTCACCTGGC
CAACCACTACGGTCGGGAAGTGTATGCCCTGCCGGGGAACATCGACACGGCAGCAGCCCGCGGCTGCCTGCAGCTCATCC
GCGACGGCGCCGGCATGATCCTGGGGATCGAGGAGCTGTTGAAAGACTTGGGCCTCCTCCAGGGATCCCCTGTGCTAAAG
CAGCCCTCGTCCACTGGCCCCAGCGATCCCCAACAGCAACTGCTCTGGCAGCTGCTAGGGGAGGGCATCCTCAGCCTCGA
TGCCCTGGCCCAGGCTAGCCAGATGGATATTGCCACCCTTTCCAGTACCCTGCTGCTTATGGAATTGGAAGGCTGGCTGG
TACAACTGCCGGGGATGCGCTACCAGCGGGCTCGCTGA

Upstream 100 bases:

>100_bases
CGGCGGGATCCAACCCTGACATCTACCCATCTCCTGCTTTTTTGCCAAGCGTTCCTTTTGCCAATCATTTAAGATACAGC
CACTACTGCGCAGAGCTAAA

Downstream 100 bases:

>100_bases
GGCTGGATCCCTGCACTGCTTCTCCGATAGGAGCACGGCAAGCGGGATCCTCGTGGCGGGGGTTGTTCACATAGGTGCTG
ACCGGATAAGCCGCCATGGC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSFPLSPSDPVGKREPSRGPGHEERERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQADAPALRQVEGIGPTLAQAIV
SARPGLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDPPPILYALGECPNWQQPAIAIVGTRAPTAYGRQWTQKVSAA
LAEAGCVVVSGLATGIDGIAHQACLDAGGKTVAVVGTGVDKVYPAHHQALYRRILAQGAILSEYPPGTPPAKEHFPQRNR
IIAGLCRATLVMEAPETSGALITAHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMILGIEELLKDLGLLQGSPVLK
QPSSTGPSDPQQQLLWQLLGEGILSLDALAQASQMDIATLSSTLLLMELEGWLVQLPGMRYQRAR

Sequences:

>Translated_385_residues
MSFPLSPSDPVGKREPSRGPGHEERERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQADAPALRQVEGIGPTLAQAIV
SARPGLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDPPPILYALGECPNWQQPAIAIVGTRAPTAYGRQWTQKVSAA
LAEAGCVVVSGLATGIDGIAHQACLDAGGKTVAVVGTGVDKVYPAHHQALYRRILAQGAILSEYPPGTPPAKEHFPQRNR
IIAGLCRATLVMEAPETSGALITAHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMILGIEELLKDLGLLQGSPVLK
QPSSTGPSDPQQQLLWQLLGEGILSLDALAQASQMDIATLSSTLLLMELEGWLVQLPGMRYQRAR
>Mature_384_residues
SFPLSPSDPVGKREPSRGPGHEERERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQADAPALRQVEGIGPTLAQAIVS
ARPGLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDPPPILYALGECPNWQQPAIAIVGTRAPTAYGRQWTQKVSAAL
AEAGCVVVSGLATGIDGIAHQACLDAGGKTVAVVGTGVDKVYPAHHQALYRRILAQGAILSEYPPGTPPAKEHFPQRNRI
IAGLCRATLVMEAPETSGALITAHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMILGIEELLKDLGLLQGSPVLKQ
PSSTGPSDPQQQLLWQLLGEGILSLDALAQASQMDIATLSSTLLLMELEGWLVQLPGMRYQRAR

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=367, Percent_Identity=34.8773841961853, Blast_Score=175, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41359; Mature: 41228

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPLSPSDPVGKREPSRGPGHEERERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQA
CCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
DAPALRQVEGIGPTLAQAIVSARPGLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDP
CCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCC
PPILYALGECPNWQQPAIAIVGTRAPTAYGRQWTQKVSAALAEAGCVVVSGLATGIDGIA
CCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HQACLDAGGKTVAVVGTGVDKVYPAHHQALYRRILAQGAILSEYPPGTPPAKEHFPQRNR
HHHHHCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHCCCHHH
IIAGLCRATLVMEAPETSGALITAHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMI
HHHHHHHHHHHEECCCCCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCEE
LGIEELLKDLGLLQGSPVLKQPSSTGPSDPQQQLLWQLLGEGILSLDALAQASQMDIATL
ECHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTLLLMELEGWLVQLPGMRYQRAR
HHHHHEEECCCHHEECCCCHHCCCC
>Mature Secondary Structure 
SFPLSPSDPVGKREPSRGPGHEERERPYWLAWARIKGIGPHRLKRLAEFFGSLERAWQA
CCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
DAPALRQVEGIGPTLAQAIVSARPGLDPEQILEETLKAGIPFLTPADPDYPPLLWEVPDP
CCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCC
PPILYALGECPNWQQPAIAIVGTRAPTAYGRQWTQKVSAALAEAGCVVVSGLATGIDGIA
CCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HQACLDAGGKTVAVVGTGVDKVYPAHHQALYRRILAQGAILSEYPPGTPPAKEHFPQRNR
HHHHHCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHCCCHHH
IIAGLCRATLVMEAPETSGALITAHLANHYGREVYALPGNIDTAAARGCLQLIRDGAGMI
HHHHHHHHHHHEECCCCCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCEE
LGIEELLKDLGLLQGSPVLKQPSSTGPSDPQQQLLWQLLGEGILSLDALAQASQMDIATL
ECHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTLLLMELEGWLVQLPGMRYQRAR
HHHHHEEECCCHHEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]