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The map label for this gene is clpS-1 [H]

Identifier: 86608169

GI number: 86608169

Start: 697611

End: 697892

Strand: Reverse

Name: clpS-1 [H]

Synonym: CYB_0683

Alternate gene names: 86608169

Gene position: 697892-697611 (Counterclockwise)

Preceding gene: 86608172

Following gene: 86608168

Centisome position: 22.91

GC content: 59.22

Gene sequence:

>282_bases
GTGGCTACGGAGACTCTGGTCAAGCCTTCTGTAACCCCAAAGCACATGCCCATGTACCGGGTGTTGCTGCACAACGACGA
TGTCAACACCATGGAGTACGTGGTGCAGGTGCTGGTGAAGGTGATCCCGGCGATGATGCCGCCGCAAGCCACTGAGATCA
TGCTGGAAGCCCACCACAACGGCGTTGCTGTGGTGATCGTGGTGCCGCGGGAGCACGCGGAGTTTTACTGTGAGCAGTTG
CGTCAGCACGGCCTCACCAGCTCCATTGAGCCGGAACGCTAA

Upstream 100 bases:

>100_bases
GAAGGCTAAAATTTCATTACAGTTTTTCCTGCTTTTGCCCCATTTTTGCGGTTTTGCGTTCCTTAGACTTCTTGTTGACC
CTGCCGAAGGAGGGATCGTC

Downstream 100 bases:

>100_bases
GCAGGAGCGGTTGGGGTGGGCCTGCTGATTGCAAAACTCAAGGCTTTGCCCTTGCCGCTGCGGCTGTTGCTGTTTTTGGG
GATCCCCCTCCTAGCCTGGC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHNGVAVVIVVPREHAEFYCEQL
RQHGLTSSIEPER

Sequences:

>Translated_93_residues
MATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHNGVAVVIVVPREHAEFYCEQL
RQHGLTSSIEPER
>Mature_92_residues
ATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHNGVAVVIVVPREHAEFYCEQLR
QHGLTSSIEPER

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 10574; Mature: 10442

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHN
CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEECCC
GVAVVIVVPREHAEFYCEQLRQHGLTSSIEPER
CEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATETLVKPSVTPKHMPMYRVLLHNDDVNTMEYVVQVLVKVIPAMMPPQATEIMLEAHHN
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEECCC
GVAVVIVVPREHAEFYCEQLRQHGLTSSIEPER
CEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA