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The map label for this gene is yidD [C]

Identifier: 86608052

GI number: 86608052

Start: 569728

End: 569997

Strand: Reverse

Name: yidD [C]

Synonym: CYB_0560

Alternate gene names: 86608052

Gene position: 569997-569728 (Counterclockwise)

Preceding gene: 86608057

Following gene: 86608050

Centisome position: 18.71

GC content: 62.96

Gene sequence:

>270_bases
ATGCCTGAACGATCGGATCCCCTCACTCGCAGCTTGATTGCCCTGATCCGGGGTTACCAGGTGGGTATTTCTCCTTGGCT
GCCGCCTGCTTGTCGCTACTACCCCACCTGCTCCCAGTACACCTTGGAAGCGGTGCGGCGCTACGGTGCCCTACGAGGGG
GTTGGCTGGGGATCCGTCGCCTCTGTCGCTGTCATCCCTGGCACCCAGGGGGCTACGATCCAGTTCCCGATTTGCCGGGA
TCCGCGCCGACCCAGAAACCATTCCGCTAG

Upstream 100 bases:

>100_bases
GGGGCTGGGAACCGGCCCTGCTCGCCTTTGCAGGCGCCTCCAGTCTGGGATAACAGCTAACCTCAAGTTACCTAGAGATG
CGCTTTTTGGACTCCGACCC

Downstream 100 bases:

>100_bases
CCGGACTCAGGAGACATTTAGGTCGATTGTGGGTAGCAGGCTACAACCTCGATTTCCACTCGGGCATTGAGGGGCAGGCG
AGCCACCTGCACGCAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MPERSDPLTRSLIALIRGYQVGISPWLPPACRYYPTCSQYTLEAVRRYGALRGGWLGIRRLCRCHPWHPGGYDPVPDLPG
SAPTQKPFR

Sequences:

>Translated_89_residues
MPERSDPLTRSLIALIRGYQVGISPWLPPACRYYPTCSQYTLEAVRRYGALRGGWLGIRRLCRCHPWHPGGYDPVPDLPG
SAPTQKPFR
>Mature_88_residues
PERSDPLTRSLIALIRGYQVGISPWLPPACRYYPTCSQYTLEAVRRYGALRGGWLGIRRLCRCHPWHPGGYDPVPDLPGS
APTQKPFR

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=71, Percent_Identity=59.1549295774648, Blast_Score=92, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y560_SYNJB (Q2JNV4)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_476814.1
- STRING:   Q2JNV4
- GeneID:   3900338
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_0560
- TIGR:   CYB_0560
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   SHRCTGH
- ProtClustDB:   CLSK2558363
- BioCyc:   SSP321332:CYB_0560-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 10095; Mature: 9964

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERSDPLTRSLIALIRGYQVGISPWLPPACRYYPTCSQYTLEAVRRYGALRGGWLGIRR
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LCRCHPWHPGGYDPVPDLPGSAPTQKPFR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PERSDPLTRSLIALIRGYQVGISPWLPPACRYYPTCSQYTLEAVRRYGALRGGWLGIRR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LCRCHPWHPGGYDPVPDLPGSAPTQKPFR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA