| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608043
Identifier: 86608043
GI number: 86608043
Start: 561907
End: 562269
Strand: Reverse
Name: 86608043
Synonym: CYB_0551
Alternate gene names: NA
Gene position: 562269-561907 (Counterclockwise)
Preceding gene: 86608044
Following gene: 86608041
Centisome position: 18.46
GC content: 61.71
Gene sequence:
>363_bases ATGGCAGACTCCGATCCCAAGCCAAGATCGCCCCTGTCGCAACGCCGGGATCCCTCTTCAGCAGAGCAGGTGAGGCTGTT GACGGAGCTGGCCGCTCCCTACCGCAGCTTGCGGCGCTTCATCTACTTGGCGGTGGGGTTCTCGGCTACCATCGGGGCGT TTGTGTTTTTCTTTCGAGCCCTGGCGGGACGGGACTTGAACACCACCTTGCCCAGCTTGGCCTTGCAGTTGGGGATCCTG GCCGGCGCCATCGGCCTGAACAGGCTGGAAAACCGCTCTCACCAGAAGGTGATCAGACAGGTCAAACAACGCTTGGGCAT GCAGCAAGACTCCCAGGAGCCCCAACGGTCGGCGGACAGTTAG
Upstream 100 bases:
>100_bases GGAAGAGCGAGATATTCTGGCCGCCTGCCGCGCTGCCGAAGCCGTCTTGGCGGGGGTTTCCGGTCGGGAGCCCCTCTTGT TGCCTGAGGAGGTGTAGCCA
Downstream 100 bases:
>100_bases CCCGCCCATTCCCCGCAGCCCCTTTCTCAATCCAGATCAAAGTCATCATCATCCGCGTCAGCACTGCGCAGATAGCGGCG CTGAGTTTGGCGAGCGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRALAGRDLNTTLPSLALQLGIL AGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS
Sequences:
>Translated_120_residues MADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRALAGRDLNTTLPSLALQLGIL AGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS >Mature_119_residues ADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRALAGRDLNTTLPSLALQLGILA GAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13353; Mature: 13222
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRA CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGRDLNTTLPSLALQLGILAGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRA CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGRDLNTTLPSLALQLGILAGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA