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The map label for this gene is psaC [H]

Identifier: 86608041

GI number: 86608041

Start: 561039

End: 561287

Strand: Reverse

Name: psaC [H]

Synonym: CYB_0549

Alternate gene names: 86608041

Gene position: 561287-561039 (Counterclockwise)

Preceding gene: 86608043

Following gene: 86608037

Centisome position: 18.42

GC content: 59.44

Gene sequence:

>249_bases
ATGGCTCACTCGGTCAAGATCTACGACACCTGCATCGGCTGCACTCAGTGTGTGCGGGCTTGTCCCACCGACGTGTTGGA
GATGGTGCCCTGGAAGGGGAACAACAAGGCTGGCATGATCGCTGCCGCTCCCCGCACCGAAGACTGCGTTGGCTGCAAAC
GCTGTGAAACCGCTTGTCCCACCGATTTTCTGAGCATCCGAGTCTACCTTGGCCCCGAAACCACCCGCAGCATGGGCTTA
GCCTACTGA

Upstream 100 bases:

>100_bases
GACTACTGTACACTGAGGGCACTTGCGCAGCGATGCTGCTGCCCTGCGGATTCGGTAAACCTTTTTTTAACGTTTCAACC
TGCTCGACTGGAGAACGCTA

Downstream 100 bases:

>100_bases
TGGGGGCACCTGGCCGCAACCCCACTCTCAACTGCCCACAGAGCACAAGTATTCCAGAGTACCAGAAAAGCAGTTTACTT
CCCAACCCAGTTCCAGCCTT

Product: photosystem I subunit VII

Products: NA

Alternate protein names: 9 kDa polypeptide; PSI-C; Photosystem I subunit VII; PsaC [H]

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MAHSVKIYDTCIGCTQCVRACPTDVLEMVPWKGNNKAGMIAAAPRTEDCVGCKRCETACPTDFLSIRVYLGPETTRSMGL
AY

Sequences:

>Translated_82_residues
MAHSVKIYDTCIGCTQCVRACPTDVLEMVPWKGNNKAGMIAAAPRTEDCVGCKRCETACPTDFLSIRVYLGPETTRSMGL
AY
>Mature_81_residues
AHSVKIYDTCIGCTQCVRACPTDVLEMVPWKGNNKAGMIAAAPRTEDCVGCKRCETACPTDFLSIRVYLGPETTRSMGLA
Y

Specific function: Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with psaA/B/D and helps assemble the prot

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017491 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 8921; Mature: 8790

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
14.6 %Cys+Met (Translated Protein)
9.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
13.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSVKIYDTCIGCTQCVRACPTDVLEMVPWKGNNKAGMIAAAPRTEDCVGCKRCETACP
CCCCEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCC
TDFLSIRVYLGPETTRSMGLAY
CCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AHSVKIYDTCIGCTQCVRACPTDVLEMVPWKGNNKAGMIAAAPRTEDCVGCKRCETACP
CCCEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCC
TDFLSIRVYLGPETTRSMGLAY
CCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA