| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607991
Identifier: 86607991
GI number: 86607991
Start: 508358
End: 509446
Strand: Direct
Name: 86607991
Synonym: CYB_0497
Alternate gene names: NA
Gene position: 508358-509446 (Clockwise)
Preceding gene: 86607990
Following gene: 86607992
Centisome position: 16.69
GC content: 51.42
Gene sequence:
>1089_bases TTGCAGGGAATAGCTTTTGAGAGAGCTTTGATGATTGAAGACTATTGGGTTGGCAGCCTGCACTTCAGCGAGCCTTTTGG GGACGATACTCTGGCTCGCCTCAACGCACTTCCCCCTGTTCAAGCTCGCAACGGCCAAACTTACAAGATCCGGGCCGAAC ATGTCACCATTCACGAGGTGAACCTGGATTACCGCACCAAGTATCGCCTGATCCTGGATCGTTTCAGCTACCTTTACCCC CAAGCCATCGGCCTGTTCATGGGCTTTGCCTTTCGGGGGGTTTACCTCATCAACAACCCGTTTAGCTTTTATTACTACCT GCGCAACAAAGATGCTGCCTACATGGTGGTCAAAGAGCTGGGGATCTCCATCCCCAAAACTTACATTCTGCCCCCTAAAG AAGCCCCCGCATTGAAAGCAGAGGACTTTAAGTATCACAAGTTTTTCGATTGGCAGGGGATGGCGGAAGATCTGGGCTGG CCAATTGTGATTAAGCCGGCGGAGGGGCGAGAGGCCATTGGAGTAGAAATAGCCCACAACATGGAGCAGCTCCTCTATTT TTACGACCGCTCTGGATCTCAGGTGATGATGATCCAAGAGAAGGTCAAAACCCCTTACCCTTGGCAGATTCGCGCCCTCT GCATTGGCCGAAAGATCATTCCGATCAAGTATATCTTTCGCAAGTTCGATGCCAGCGAATATCTGTTTGATCCAGAATTT CTTACCCCGGAAATGGGCCAGAAAGTCATCAATACCTGTCGGATTATCAATCGAGTTTTGGGCTATGAAATGAACTCGGT GGAGCTATTCATCGACGAGCAGGGAGAGCTGCAGGCCATCGACTTTAACAATCCGGTGCCCGATGGACGGCTCAAGGCTT TGGGAGAGATCTTCTATAACGATTACCAGCAGGCCCTTTGCGATTTGGTCTTGGACATCGTGCGGGAACAGCGTCCTTTC GACTTCCTGCCCCCAGATATCAACCGCTTTGCCCACATTGCCCGACGGGCCGATCTCACCCGCGAGCAGAAGTTTCAGAT GGCTTTGGAATTGGCCAACCGTTACTACGAGCCCAGGGATCCCGATTAA
Upstream 100 bases:
>100_bases GCTCAGCCGCAACGACATCCCCCATCAACTGGAGGTATGGGAGGGGGATCACGACTGGCCCACTTGGCAAGCGCAAATCC GCGCCTTCGCGTAGGATCCC
Downstream 100 bases:
>100_bases AATCAAACCAGAACCCACAAGTGTGGTTTTCCGCTGGGGAAGTTGTGGACGGGCAAAGGAGCAGCAGCGTGGTTTCCGAC CCCGTTTCAGGGTGGTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEVNLDYRTKYRLILDRFSYLYP QAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKELGISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGW PIVIKPAEGREAIGVEIAHNMEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYNDYQQALCDLVLDIVREQRPF DFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRDPD
Sequences:
>Translated_362_residues MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEVNLDYRTKYRLILDRFSYLYP QAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKELGISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGW PIVIKPAEGREAIGVEIAHNMEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYNDYQQALCDLVLDIVREQRPF DFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRDPD >Mature_362_residues MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEVNLDYRTKYRLILDRFSYLYP QAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKELGISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGW PIVIKPAEGREAIGVEIAHNMEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYNDYQQALCDLVLDIVREQRPF DFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRDPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42474; Mature: 42474
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEV CCCCCHHHEEEEEEEEECEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEE NLDYRTKYRLILDRFSYLYPQAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEEECCCCHHHHHHHH GISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGWPIVIKPAEGREAIGVEIAHN CCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEEECCCCCCEECHHHHHH MEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF HHHHHHHCCCCCCEEEEEEHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHEECCCC LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYN CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHH DYQQALCDLVLDIVREQRPFDFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRD HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC PD CC >Mature Secondary Structure MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEV CCCCCHHHEEEEEEEEECEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEE NLDYRTKYRLILDRFSYLYPQAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEEECCCCHHHHHHHH GISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGWPIVIKPAEGREAIGVEIAHN CCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEEECCCCCCEECHHHHHH MEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF HHHHHHHCCCCCCEEEEEEHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHEECCCC LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYN CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHH DYQQALCDLVLDIVREQRPFDFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRD HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC PD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA