| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607990
Identifier: 86607990
GI number: 86607990
Start: 507620
End: 508351
Strand: Direct
Name: 86607990
Synonym: CYB_0496
Alternate gene names: NA
Gene position: 507620-508351 (Clockwise)
Preceding gene: 86607988
Following gene: 86607991
Centisome position: 16.66
GC content: 60.25
Gene sequence:
>732_bases ATGGCCTACGCTCGCCGCTACTTGCGCTTTCCCTCTCAGATCTTGGGCCGGGAAATGGAGATGCTCCACTTTGGGCATCA CGGCTACCCGCTGATCTGTCTGCCCACCAGCAACGGGCGTTTTTTTGACGTGGAAGATCGCGGCATTATTGCCAGCCTCA GCCATCATCTGGAACAGGGCTATTTGCAGGCTTTTTGCGTGGAAACCCTGGATTGGGAGACTTTGTTCAACCGCCAGCTG GACTTGCCCCAACGGCGGGAGCGTTGGCTGTTGCTGGAGCAGCACTGGGTAGAAGAGCTGATCCCCTACGCCAAGGCCGA GGCGCAAAATGAGTTTCTGGTGGTGGCTGGGTTTTCCCTGGGAGCTACCCATGCTGTCAACCTCACCTGTCGGCATCCCG GCCTAGTGCGCCGTTGTTTGGCTCTGGGGGGGCCCTACGATGTGGCCGCTCTCGGCTCTGTCACCGGCTGGGATCCCCAA CGGGCAGAGCAGGAGCTGTATTTCATCAACCCGCTGGCCTATATGTCCAACATGAGCCGGCAACTCTGGGATCAGTTGGG CGGGCGCAACACCGAGCTGAAGTTGCTCACCGCTCGCCACGACCACTGCCTCAGCGACAACCTGCGCCTGGCAGAAGTGC TCAGCCGCAACGACATCCCCCATCAACTGGAGGTATGGGAGGGGGATCACGACTGGCCCACTTGGCAAGCGCAAATCCGC GCCTTCGCGTAG
Upstream 100 bases:
>100_bases ACCTTTCCAGAGAGTGCCCTTTGCCTTGCTCGACCAGGCAGAGCAGAATGCTTCCCCCGGAAAGGTTGGGTATTTCTTGA GGATCCCTTCCCCGTTTTTC
Downstream 100 bases:
>100_bases GATCCCTTGCAGGGAATAGCTTTTGAGAGAGCTTTGATGATTGAAGACTATTGGGTTGGCAGCCTGCACTTCAGCGAGCC TTTTGGGGACGATACTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase Superfamily; Esterase Superfamily Protein
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAYARRYLRFPSQILGREMEMLHFGHHGYPLICLPTSNGRFFDVEDRGIIASLSHHLEQGYLQAFCVETLDWETLFNRQL DLPQRRERWLLLEQHWVEELIPYAKAEAQNEFLVVAGFSLGATHAVNLTCRHPGLVRRCLALGGPYDVAALGSVTGWDPQ RAEQELYFINPLAYMSNMSRQLWDQLGGRNTELKLLTARHDHCLSDNLRLAEVLSRNDIPHQLEVWEGDHDWPTWQAQIR AFA
Sequences:
>Translated_243_residues MAYARRYLRFPSQILGREMEMLHFGHHGYPLICLPTSNGRFFDVEDRGIIASLSHHLEQGYLQAFCVETLDWETLFNRQL DLPQRRERWLLLEQHWVEELIPYAKAEAQNEFLVVAGFSLGATHAVNLTCRHPGLVRRCLALGGPYDVAALGSVTGWDPQ RAEQELYFINPLAYMSNMSRQLWDQLGGRNTELKLLTARHDHCLSDNLRLAEVLSRNDIPHQLEVWEGDHDWPTWQAQIR AFA >Mature_242_residues AYARRYLRFPSQILGREMEMLHFGHHGYPLICLPTSNGRFFDVEDRGIIASLSHHLEQGYLQAFCVETLDWETLFNRQLD LPQRRERWLLLEQHWVEELIPYAKAEAQNEFLVVAGFSLGATHAVNLTCRHPGLVRRCLALGGPYDVAALGSVTGWDPQR AEQELYFINPLAYMSNMSRQLWDQLGGRNTELKLLTARHDHCLSDNLRLAEVLSRNDIPHQLEVWEGDHDWPTWQAQIRA FA
Specific function: Unknown
COG id: COG4947
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28148; Mature: 28017
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYARRYLRFPSQILGREMEMLHFGHHGYPLICLPTSNGRFFDVEDRGIIASLSHHLEQG CCHHHHHHCCCHHHHCCHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHH YLQAFCVETLDWETLFNRQLDLPQRRERWLLLEQHWVEELIPYAKAEAQNEFLVVAGFSL HHHHHHHHHCCHHHHHHCCCCCCHHHHHEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCC GATHAVNLTCRHPGLVRRCLALGGPYDVAALGSVTGWDPQRAEQELYFINPLAYMSNMSR CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCEEEEECHHHHHHHHHH QLWDQLGGRNTELKLLTARHDHCLSDNLRLAEVLSRNDIPHQLEVWEGDHDWPTWQAQIR HHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHEE AFA ECC >Mature Secondary Structure AYARRYLRFPSQILGREMEMLHFGHHGYPLICLPTSNGRFFDVEDRGIIASLSHHLEQG CHHHHHHCCCHHHHCCHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHH YLQAFCVETLDWETLFNRQLDLPQRRERWLLLEQHWVEELIPYAKAEAQNEFLVVAGFSL HHHHHHHHHCCHHHHHHCCCCCCHHHHHEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCC GATHAVNLTCRHPGLVRRCLALGGPYDVAALGSVTGWDPQRAEQELYFINPLAYMSNMSR CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHCCEEEEECHHHHHHHHHH QLWDQLGGRNTELKLLTARHDHCLSDNLRLAEVLSRNDIPHQLEVWEGDHDWPTWQAQIR HHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHEE AFA ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA