| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607992
Identifier: 86607992
GI number: 86607992
Start: 509676
End: 510863
Strand: Direct
Name: 86607992
Synonym: CYB_0498
Alternate gene names: NA
Gene position: 509676-510863 (Clockwise)
Preceding gene: 86607991
Following gene: 86607993
Centisome position: 16.73
GC content: 54.55
Gene sequence:
>1188_bases ATGTCAACCGGGTTGAAATGGCGCTGGTGCCACGATATTCGCGAGATCCCGGCAGGGGCCTGGCACGCCTTGCAAACGGA GCGCACCTCTCCTTTTTTGGAATACGAATGGTTGCACAGCCTAGAGAGCTCAGGTTGTGCCAGCCGCAGGACAGGGTGGC TGCCCTGTCACCTGTTGGTGGAGGCGGACGGCCAGTTGGTTGCTGCTGCCCCCTTGTATTTGAAAAGCCACAGCCAGGGG GAGTTTGTCTTTGACCAAGAATGGGCTGCAGTTGCCGGCCAATTGGGGGAACGCTACTACCCGAAGTTAATCGGCATGGC CCCCTTCACCCCGGCCACGGGCTATCGCATCCTCGTCCATCCCGAGTATTCGGAAGCAGAGGTGTGGTCGTTGATGCTGG CAGCCATTGACCGGTTTTGCCAAGAGAAGGATATTTCGGTGTTTAGCTTGCTTTATGTAGATCTGGACTGGCGGACTCAA TTGGAGTCGGATGGATTTACGCCCCGGATCACCCACAACTACCAGTGGCACAACCCCGGCTACCGCTCTTACGAAGACTT TTTGAGCCAGTTCAATGCCAACCAGCGGCGCAACATCAAGCGAGAGCGGGCTGCAATGGAAAAAAGCGGCCTAGAACTCA AGATTTACACAGGAGAGGAGATCACGCCCCGCCTGTTGTCTCTGATGTACGACTTTTACAGCAACACCTGCGCCCAATTT TGGAACTGGAGCAAATATCTCAATCGCCGCTTTTTCGAGTCTCTCTATCCCAACTATCGGGAGCGAGTTGTGCTGGTGGC CGGGGAACGGAATGCAGAAATTGTGGGGATGTCTTTTTGTATTCGTAAGGGAGATCGCCTGTTCGGGCGCTACTGGGGTT GTCGGGAGGAGGTGAAGTTTTTGCACTTTAACGTTTGCTACTACGAGCCCATTGCCCTCGCCATCCGAGAAGGGATCCGC AACTTTGATCCCGGCGCAGGGGGATCCCATAAGATTCGACGGGGATTTCCGGCCACGCCTGTGTACAGCTACCACCGCTT CTACAGCCGAAGGCTACAACAGGTTTTGGTGCCCTACCTAAACCGGGTTAACCCTCTCATGTTGGCCGAGCTGGAGAACG TGAATCAAAACGAGGTTCCTTTTCGAGAAGATGTTTTGCCTTCTCTATCTGCTTTGACCAAGGAGTGA
Upstream 100 bases:
>100_bases TGCTGCATTTGGCGGCGTTGAGTCGGCAAGAGCATTGGGGGCCTTTTCCCAGCCAAGCTGAGGCAACTGGGCGGCGGGTT GGTCTGATCCGAGCAGGCAA
Downstream 100 bases:
>100_bases ACCACTTCATTGGATGGGGTTTTCAATCCCGTAAGCAGTTGGCGGCTGACATGCTTTTTGCCTTGCTACAGCTTTTTCCG GCAATGCTGACTCCAGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSTGLKWRWCHDIREIPAGAWHALQTERTSPFLEYEWLHSLESSGCASRRTGWLPCHLLVEADGQLVAAAPLYLKSHSQG EFVFDQEWAAVAGQLGERYYPKLIGMAPFTPATGYRILVHPEYSEAEVWSLMLAAIDRFCQEKDISVFSLLYVDLDWRTQ LESDGFTPRITHNYQWHNPGYRSYEDFLSQFNANQRRNIKRERAAMEKSGLELKIYTGEEITPRLLSLMYDFYSNTCAQF WNWSKYLNRRFFESLYPNYRERVVLVAGERNAEIVGMSFCIRKGDRLFGRYWGCREEVKFLHFNVCYYEPIALAIREGIR NFDPGAGGSHKIRRGFPATPVYSYHRFYSRRLQQVLVPYLNRVNPLMLAELENVNQNEVPFREDVLPSLSALTKE
Sequences:
>Translated_395_residues MSTGLKWRWCHDIREIPAGAWHALQTERTSPFLEYEWLHSLESSGCASRRTGWLPCHLLVEADGQLVAAAPLYLKSHSQG EFVFDQEWAAVAGQLGERYYPKLIGMAPFTPATGYRILVHPEYSEAEVWSLMLAAIDRFCQEKDISVFSLLYVDLDWRTQ LESDGFTPRITHNYQWHNPGYRSYEDFLSQFNANQRRNIKRERAAMEKSGLELKIYTGEEITPRLLSLMYDFYSNTCAQF WNWSKYLNRRFFESLYPNYRERVVLVAGERNAEIVGMSFCIRKGDRLFGRYWGCREEVKFLHFNVCYYEPIALAIREGIR NFDPGAGGSHKIRRGFPATPVYSYHRFYSRRLQQVLVPYLNRVNPLMLAELENVNQNEVPFREDVLPSLSALTKE >Mature_394_residues STGLKWRWCHDIREIPAGAWHALQTERTSPFLEYEWLHSLESSGCASRRTGWLPCHLLVEADGQLVAAAPLYLKSHSQGE FVFDQEWAAVAGQLGERYYPKLIGMAPFTPATGYRILVHPEYSEAEVWSLMLAAIDRFCQEKDISVFSLLYVDLDWRTQL ESDGFTPRITHNYQWHNPGYRSYEDFLSQFNANQRRNIKRERAAMEKSGLELKIYTGEEITPRLLSLMYDFYSNTCAQFW NWSKYLNRRFFESLYPNYRERVVLVAGERNAEIVGMSFCIRKGDRLFGRYWGCREEVKFLHFNVCYYEPIALAIREGIRN FDPGAGGSHKIRRGFPATPVYSYHRFYSRRLQQVLVPYLNRVNPLMLAELENVNQNEVPFREDVLPSLSALTKE
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46201; Mature: 46070
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGLKWRWCHDIREIPAGAWHALQTERTSPFLEYEWLHSLESSGCASRRTGWLPCHLLV CCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE EADGQLVAAAPLYLKSHSQGEFVFDQEWAAVAGQLGERYYPKLIGMAPFTPATGYRILVH ECCCCEEEECCCEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC PEYSEAEVWSLMLAAIDRFCQEKDISVFSLLYVDLDWRTQLESDGFTPRITHNYQWHNPG CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCCCCCCEEECCEECCCCC YRSYEDFLSQFNANQRRNIKRERAAMEKSGLELKIYTGEEITPRLLSLMYDFYSNTCAQF CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH WNWSKYLNRRFFESLYPNYRERVVLVAGERNAEIVGMSFCIRKGDRLFGRYWGCREEVKF HCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHCCCHHHHHHCCCHHHCEE LHFNVCYYEPIALAIREGIRNFDPGAGGSHKIRRGFPATPVYSYHRFYSRRLQQVLVPYL EEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH NRVNPLMLAELENVNQNEVPFREDVLPSLSALTKE HCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure STGLKWRWCHDIREIPAGAWHALQTERTSPFLEYEWLHSLESSGCASRRTGWLPCHLLV CCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE EADGQLVAAAPLYLKSHSQGEFVFDQEWAAVAGQLGERYYPKLIGMAPFTPATGYRILVH ECCCCEEEECCCEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC PEYSEAEVWSLMLAAIDRFCQEKDISVFSLLYVDLDWRTQLESDGFTPRITHNYQWHNPG CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCCCCCCEEECCEECCCCC YRSYEDFLSQFNANQRRNIKRERAAMEKSGLELKIYTGEEITPRLLSLMYDFYSNTCAQF CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH WNWSKYLNRRFFESLYPNYRERVVLVAGERNAEIVGMSFCIRKGDRLFGRYWGCREEVKF HCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHCCCHHHHHHCCCHHHCEE LHFNVCYYEPIALAIREGIRNFDPGAGGSHKIRRGFPATPVYSYHRFYSRRLQQVLVPYL EEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH NRVNPLMLAELENVNQNEVPFREDVLPSLSALTKE HCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA