| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607771
Identifier: 86607771
GI number: 86607771
Start: 287288
End: 287800
Strand: Reverse
Name: 86607771
Synonym: CYB_0272
Alternate gene names: NA
Gene position: 287800-287288 (Counterclockwise)
Preceding gene: 86607779
Following gene: 86607770
Centisome position: 9.45
GC content: 61.99
Gene sequence:
>513_bases ATGAGCTATTTAATCGCGGTACTGCCGGATCGCATAGCCGCTGAGGCGGCCTACAGCGCCCTGGAACAAGCCGGCTTTTC CCTGGAGCGATTGCATCTGCTGGGGCGGGGCTACAAGAGTGCCGACGAGTTTGGGCTGATTGACCCGGCCCAAGCGGCCC GCCGTCAGATGCGGCGCCTGGCCATTTGGTTGGTGCCCTTTGGCTTTTTGGCCGGGGTGGGGTTCAGCGTTTTGAGTGGT TTGGATACCTTTGCCTGGGCGGGACCTATAGGCAACCACCTGATCGGCGGCCTATTGGGCGCGATGGGCGGGGCCATGGG CAGCTTTTTCGTCGGCGGCGGAGTGGGCTTGTCTGGTGGCTCCGGCGATGCTTTGGCTTACCGCAACCGCCTCGCTGCGG GCAAGTACGTGCTCATTGTGGAAGAAGAGAACGAAACCCGCCTCCGCGAAGCCACGCGGATTTTGCGCCAGTTTGAGCCG GAAAATCTGCAAGGGTACAGAGAGCGCCCGTAG
Upstream 100 bases:
>100_bases GCTAGTAGATGGAGCGCTAGTGGAGCCAGACTGGGTCACAGGGATCCTCGCTCAAACTTGGCAGACAATAAGATGTGGAA CGGATTGGATCCCCGGGTCC
Downstream 100 bases:
>100_bases ACTGGGAGATCGGGGTGGCTACTGAGGGCAACTCAGGGAGGTCTGAAAGCATGTCTTGGCTGTGGCAGCAAGTCCCATCG CCGCTTGGGCGGTGGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSYLIAVLPDRIAAEAAYSALEQAGFSLERLHLLGRGYKSADEFGLIDPAQAARRQMRRLAIWLVPFGFLAGVGFSVLSG LDTFAWAGPIGNHLIGGLLGAMGGAMGSFFVGGGVGLSGGSGDALAYRNRLAAGKYVLIVEEENETRLREATRILRQFEP ENLQGYRERP
Sequences:
>Translated_170_residues MSYLIAVLPDRIAAEAAYSALEQAGFSLERLHLLGRGYKSADEFGLIDPAQAARRQMRRLAIWLVPFGFLAGVGFSVLSG LDTFAWAGPIGNHLIGGLLGAMGGAMGSFFVGGGVGLSGGSGDALAYRNRLAAGKYVLIVEEENETRLREATRILRQFEP ENLQGYRERP >Mature_169_residues SYLIAVLPDRIAAEAAYSALEQAGFSLERLHLLGRGYKSADEFGLIDPAQAARRQMRRLAIWLVPFGFLAGVGFSVLSGL DTFAWAGPIGNHLIGGLLGAMGGAMGSFFVGGGVGLSGGSGDALAYRNRLAAGKYVLIVEEENETRLREATRILRQFEPE NLQGYRERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18275; Mature: 18144
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLIAVLPDRIAAEAAYSALEQAGFSLERLHLLGRGYKSADEFGLIDPAQAARRQMRRL CCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH AIWLVPFGFLAGVGFSVLSGLDTFAWAGPIGNHLIGGLLGAMGGAMGSFFVGGGVGLSGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SGDALAYRNRLAAGKYVLIVEEENETRLREATRILRQFEPENLQGYRERP CCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SYLIAVLPDRIAAEAAYSALEQAGFSLERLHLLGRGYKSADEFGLIDPAQAARRQMRRL CCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH AIWLVPFGFLAGVGFSVLSGLDTFAWAGPIGNHLIGGLLGAMGGAMGSFFVGGGVGLSGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SGDALAYRNRLAAGKYVLIVEEENETRLREATRILRQFEPENLQGYRERP CCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA