| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607779
Identifier: 86607779
GI number: 86607779
Start: 295074
End: 295370
Strand: Reverse
Name: 86607779
Synonym: CYB_0280
Alternate gene names: NA
Gene position: 295370-295074 (Counterclockwise)
Preceding gene: 86607783
Following gene: 86607771
Centisome position: 9.69
GC content: 57.24
Gene sequence:
>297_bases ATGGCAACGATTCGCTTCGTCAACGAGAACCGAGAGATCTTCGTCGCTGAAGGCGCTAACCTGCGCCTGAAGGCTCTGGA AAACCAGATCGATCTCTACAAAATGATGGCCAAGCTGCTCAACTGCGGCGGCAACGGCCAGTGTGGCACCTGTGTGGTGG AGATTGTTGAGGGATCCGAGAACCTCTCCCCTCGCACCGAGGCGGAAAACCGCAAGCTCAAGCGCAAGCCCGACAGCTAC CGCCTTGCTTGCCAGACCAAGGTGTTGGGGGATGTTTCGGTCAAAACCAAGCCCTAG
Upstream 100 bases:
>100_bases CGCCGGAGATTAAAAATATGACTTAAAATGTTACAATACTTAGCAACTGTGAGCGCTCTCCTGGCTCAGGCTGAAAGGTG TCGTGGTTTCTGGCAGGGGT
Downstream 100 bases:
>100_bases CCTTGGCCCGCCCGTTTTCCCTTTGGGCAAGTCGTACTCAAGAGTGGTATGCTGACTGCCAGTTGGGCTTGTGGCATTTG GAGTTATGGAGACGAACTAC
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Ferredoxin 2Fe-2S Type; Hydrogenase Component
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MATIRFVNENREIFVAEGANLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSENLSPRTEAENRKLKRKPDSY RLACQTKVLGDVSVKTKP
Sequences:
>Translated_98_residues MATIRFVNENREIFVAEGANLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSENLSPRTEAENRKLKRKPDSY RLACQTKVLGDVSVKTKP >Mature_97_residues ATIRFVNENREIFVAEGANLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSENLSPRTEAENRKLKRKPDSYR LACQTKVLGDVSVKTKP
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10916; Mature: 10785
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIRFVNENREIFVAEGANLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSE CCEEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC NLSPRTEAENRKLKRKPDSYRLACQTKVLGDVSVKTKP CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECC >Mature Secondary Structure ATIRFVNENREIFVAEGANLRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSE CEEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC NLSPRTEAENRKLKRKPDSYRLACQTKVLGDVSVKTKP CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA