Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607770

Identifier: 86607770

GI number: 86607770

Start: 286566

End: 287237

Strand: Reverse

Name: 86607770

Synonym: CYB_0271

Alternate gene names: NA

Gene position: 287237-286566 (Counterclockwise)

Preceding gene: 86607771

Following gene: 86607769

Centisome position: 9.43

GC content: 63.54

Gene sequence:

>672_bases
ATGTCTTGGCTGTGGCAGCAAGTCCCATCGCCGCTTGGGCGGTGGCGGAAGGAAGGGATCCCCAGCTTTGCCGCTGCTGG
GGGTGCACTGGCAGTTACGGGGTTTTTTTCGCCGGCTTTTGCCCACCACGCCCTGGGAGGGAAACTGCCTGCAACGGCCT
GGGAGGGATTTCTCTCCGGGCTGGCTCACCCTGTCATTGGCTTGGATCACCTGGCCTTCGTCGTGGCCATCGGTCTTGTG
GCGGCGGGGCAGCCCTGGCGCTACGGGATCCCTTTGGGCTTTGTGCTAGCGGGTCTGGTGGGCACTGGGATCCACCTGGC
CGGCTGGGATCCCCTGGGACTGACGGAGCTGGCCATTGCCTCTTCCGTGGTTCTCTTCGGCTTGCTGCTGGTGCAACCGC
GGCAGATCCCAAGTTGGCTCTTGCTAATAGGGGGATCCCTGGCGGGGCTATTCCATGGCTATGCCTACGCCGAAACCATT
ATCGGCGCCCAACCCATGCCTTGGGTGGGATATCTACTGGGGTTGAGCACCGTCCAGTATGGGGTAGCTCTCCTGGCCCT
TTGGGCAGCAGAACGCTGGGGGTTGCGGATCCCTGGCTTAACCCGCTGGGCCGGCTGGGCGATTACAGTGGTGGGGGCTG
CCTTCCTGACCTTGGCAGTGGTGGGCGCGTAA

Upstream 100 bases:

>100_bases
TGCGCCAGTTTGAGCCGGAAAATCTGCAAGGGTACAGAGAGCGCCCGTAGACTGGGAGATCGGGGTGGCTACTGAGGGCA
ACTCAGGGAGGTCTGAAAGC

Downstream 100 bases:

>100_bases
AAAGCGCTAATTTTGCTCCCTTGCGCTCGGGATCCCCGATCCGGTACAAGGATAGCGGTGAAGATCTGTAAAACGAGGGG
AGATCCCATGGAGCGCACCT

Product: HupE/UreJ family protein

Products: NA

Alternate protein names: HupE/UreJ Protein; HupE / UreJ Protein; HupE/UreJ Family Protein; HupE / UreJ Family Protein; Hydrogenase Accessory Protein HupE / UreJ Protein; Hydrogenase Accessory Protein HupE/UreJ Protein

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSGLAHPVIGLDHLAFVVAIGLV
AAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIASSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETI
IGAQPMPWVGYLLGLSTVQYGVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA

Sequences:

>Translated_223_residues
MSWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSGLAHPVIGLDHLAFVVAIGLV
AAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIASSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETI
IGAQPMPWVGYLLGLSTVQYGVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA
>Mature_222_residues
SWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSGLAHPVIGLDHLAFVVAIGLVA
AGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIASSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETII
GAQPMPWVGYLLGLSTVQYGVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA

Specific function: Unknown

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23333; Mature: 23202

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSG
CCCHHHHCCHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAHPVIGLDHLAFVVAIGLVAAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHH
SSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETIIGAQPMPWVGYLLGLSTVQY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSG
CCHHHHCCHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAHPVIGLDHLAFVVAIGLVAAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHH
SSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETIIGAQPMPWVGYLLGLSTVQY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA