| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607741
Identifier: 86607741
GI number: 86607741
Start: 254879
End: 255289
Strand: Reverse
Name: 86607741
Synonym: CYB_0242
Alternate gene names: NA
Gene position: 255289-254879 (Counterclockwise)
Preceding gene: 86607742
Following gene: 86607740
Centisome position: 8.38
GC content: 53.77
Gene sequence:
>411_bases ATGGAAGTTTGCGTCACCTACCGCGATGGTGTTCAGTTCCAAGCGGAAAGCCGAGGGCACCGCATTCTCAGCGATCAGCC TTTGGACAACCACGGTCGAGATCAGGGAATGACGCCGCCGGAATGGTTTTTGGCTTCTCTGGGTGCCTGTGTTGGTTTTT ATGCCGTCAAATATCTGGAAGCGCGACAGTTGGATCCTAGTGGACTAGAGGTGGTGGTCACGGCGGAGAAAGTTGAGCAT CCGGCTCGCCTAGACAACATTCGCATCCAAGTCAAAATCGGGATCCCGCTGGACGAAAGGCATCAAAAGGGTCTGGAAAA AACAGTTGATGCCTGCATCATTCACAATACGCTTACCCATCCCCCCACCCTGACCACCGAAATCCAAGTTCCTGCTCCTG TTGGCGCCTAG
Upstream 100 bases:
>100_bases TCCAGATTGGCCCTGAGCTGACTGGAATCCAAGTTGATCCTCAGGCTAACTTTACGGACTCTATGTGAACTGAAGAATAC CCCAAGAGGAGGGATCCCCA
Downstream 100 bases:
>100_bases ATTGCCATTCGGGTTATTCGACTATTTCCAACTATCCGATTGTCAATTGTTCCTATCGTCTAAGTCTTGATGAGTTTTGG AGGGATCCACCGATGCCAGT
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MEVCVTYRDGVQFQAESRGHRILSDQPLDNHGRDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPSGLEVVVTAEKVEH PARLDNIRIQVKIGIPLDERHQKGLEKTVDACIIHNTLTHPPTLTTEIQVPAPVGA
Sequences:
>Translated_136_residues MEVCVTYRDGVQFQAESRGHRILSDQPLDNHGRDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPSGLEVVVTAEKVEH PARLDNIRIQVKIGIPLDERHQKGLEKTVDACIIHNTLTHPPTLTTEIQVPAPVGA >Mature_136_residues MEVCVTYRDGVQFQAESRGHRILSDQPLDNHGRDQGMTPPEWFLASLGACVGFYAVKYLEARQLDPSGLEVVVTAEKVEH PARLDNIRIQVKIGIPLDERHQKGLEKTVDACIIHNTLTHPPTLTTEIQVPAPVGA
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15062; Mature: 15062
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVCVTYRDGVQFQAESRGHRILSDQPLDNHGRDQGMTPPEWFLASLGACVGFYAVKYLE CEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARQLDPSGLEVVVTAEKVEHPARLDNIRIQVKIGIPLDERHQKGLEKTVDACIIHNTLTH HHCCCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC PPTLTTEIQVPAPVGA CCCCEEEEECCCCCCC >Mature Secondary Structure MEVCVTYRDGVQFQAESRGHRILSDQPLDNHGRDQGMTPPEWFLASLGACVGFYAVKYLE CEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARQLDPSGLEVVVTAEKVEHPARLDNIRIQVKIGIPLDERHQKGLEKTVDACIIHNTLTH HHCCCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC PPTLTTEIQVPAPVGA CCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA