| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is adhE [H]
Identifier: 86607740
GI number: 86607740
Start: 252156
End: 254786
Strand: Reverse
Name: adhE [H]
Synonym: CYB_0241
Alternate gene names: 86607740
Gene position: 254786-252156 (Counterclockwise)
Preceding gene: 86607741
Following gene: 86607739
Centisome position: 8.36
GC content: 57.47
Gene sequence:
>2631_bases ATGCCAGTAACCAATCTAGCCGAGCTGGAAACCTTGATCCAGCAGGTGAAGGCTGCCCAAGCTGAATATGCAACTTTCAC CCAAGAACAGGTAGACCGGATTTTTCACAAAGCCGCTCTGGCTGCCAACAACGAACGGATCCCGTTGGCCAAGCTGGCGG TACAGGAAACCGGCATGGGTATTGTGGAGGACAAGGTGATCAAAAATCACTTTGCCTCGGAATACATTTACAACAAATAC AAACACGAGAAAACCTGCGGGGTTATCGAGCGGGATGAGAGCTTTGGCTACGAGCGCATTGCTGAACCGGTGGGTCTTTT GGCAGGTATTGTGCCGGTAACCAACCCCACGTCAACGACCATTTTCAAGGCTCTGATCACCCTCAAAACCCGCAACGGCA TTATCTTTTCCCCTCATCCCCGCGCCAAAAAATGTACTATTGCCGCAGCCAAAGTGGTTAAGGAAGCCGCCGAGGCAGCG GGTGCTCCCGTGGGGCTCATTGGCTGGATCGATGAGCCCACCATCGAGCTGTCCCAGGCTTTGATGCAGCATCCTGAGGT GAAGCTGATCTTGGCTACCGGCGGGCCTGGCATGGTTAAAGCGGCCTACTCTTCGGGCCACCCGTCTTTGGGGGTGGGAG CGGGCAATACCCCGGCAGTGATCGATGCCAGTGCCGATATTCCCATGGCTGTCAGCTCGATTTTGTTGAGCAAGACCTTC GACAACGGCATGATCTGTGCCTCAGAACAGGCAGTGGTGGTGGTGGATGCCATCTACGAGCAGGTCAAGGCCGAGTTCGG CCATCGGGGGGCCTACATTTTGGATCCGGAACAAATCGAAGCCGTGCGCCGCATCCTTCTCAAAGACGGTCGCCTCAATC CGGCCATTGTGGGCCAGTCGGTGCAGACCATCGCTGCCCTGGCCGGTATCCAGGTACCCGAAGGCACCAAACTGCTGATT GGGGAAGTGGAGAAGGTGGGGCCGGAGGAGCCCTTCTCCTACGAAAAATTGGCCCCTGTTCTGGCCCTCTACCGCGCCAA CGATTTCCACAGCGCCGTAGATGTTGCTGTCCAACTGGTCAATTTCGGCGGGCGGGGACACACCTCTGTTTTGTACACAG ATCCCGCCAATCGGGACGATATTGCCTACTTTGAAAATGCCCTGCAAACCGGTCGAGTCTTGATCAACACTCCCTCTTCA CAAGGGGCCATTGGGGATCTCTACAACTTCAAGCTAGATCCCTCTCTGACTTTGGGCTGTGGCACTTGGGGAGGCAATTC GATCTCCGAGAATGTGGGGCCGCGCCACCTGCTCAACATTAAAACGGTAACCCAACGTCGGGAAAACATGCTCTGGTTTC GGATCCCGCCCAAGGTTTACTTCAAGCCCGGATGTCTACCCATTGCTCTGCGGGAATTGGCCGGCAAAAAACGCGCCTTT TTGGTGACCGATAAGCCGCTCTTTGAGTTGGGCATATTGCATCCCATCACCCAGGTTTTGGATGAGATTCGCGTGAGCTG GGATGTGTACCACGATGTAGAGCCGGATCCCACCCTCAGCAACGTCAATCGCGGTCTGGAGCAGTTGCGCCAGTTTCAAC CGGATGTGATCATCGCGGTCGGTGGGGGATCCCCGATGGATGCGGCCAAGGTGATGTGGCTGATGTACGAGCAGCCCCAG GTGGAGTTTGAAGGCTTGGCGATGCGCTTTATGGACATCCGCAAGCGGGTTTACGAGCTGCCCCCACTGGGACAAAAAGC TCAGCTCATCTGCATCCCCACCACTTCCGGCACGGGATCCGAGGTGACGCCCTTTGCCGTAGTGACCGATGACCGGGTGG GGATCAAATACCCCCTGGCGGACTACGCCCTCACCCCCACCATGGCCATTGTGGATCCGGATCTCACCTTAAAGATGCCC AAGAAGCTAACGGCTTACGGCGGCATCGATGCCCTCACCCATGCTCTGGAAGCCTATGTGTCGGTGATGGCCAGCGACTT TACCGATGGGCTTGCCCTGCAGGCCATCAAGCTCCTGATGACCTACCTGCCGCGGGCCTACGAGAAGGGCGCCGAGGATC CCGAAGCGCGGGAAAAAGTCCACTACGCCGCCACCATTGCCGGCATGGCCTTTGCCAACGCCTTTTTGGGGGTGTGCCAC TCCCTGGCCCACAAGCTGGGATCCACCTTCCATCTGCCCCACGGCCTGGCCAATGCCCTGATGATTACCCACGTCATCCG CTACAACGCCACCGACGCCCCCTTCAAGCAGGCCATTTTTCCCCAATACCGCTATCCCAACGCCAAACACCGCTACGCGG AAATTGCCGATTACCTGCAGTTGGGCGGGGCGGATGACGATGAAAAGGTCATGCGCCTGATTGAGGCCATCGAAGAACTC AAGCGGAAACTGGGGATCCCGGCCACCATTCGCGAGGCCCTGGGGGAGAAAGAGCGGGAGTTTTACGACCGTCTGGAGGC GATGGCGGAGCAAGCCTTTGACGACCAATGCACCGGCGCCAACCCCCGCTATCCCCTCATTCAAGACATGAAGGAGCTGT ACGTTTTGGCCTATCGGGGCTGCCGGGTGGATTCTGCCCTCTACCACCAGCCGGAACCAGTGTTGGCCTAA
Upstream 100 bases:
>100_bases GCGCCTAGATTGCCATTCGGGTTATTCGACTATTTCCAACTATCCGATTGTCAATTGTTCCTATCGTCTAAGTCTTGATG AGTTTTGGAGGGATCCACCG
Downstream 100 bases:
>100_bases GGAGTAGGGTATGTGGCAACGACTGGATCCCAGTGTGGATATCTGGAGGGCCCGATCCCATCCCCTGAATCCCATTTTTC TGCCCCGTTCGGTGGCGGTG
Product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MPVTNLAELETLIQQVKAAQAEYATFTQEQVDRIFHKAALAANNERIPLAKLAVQETGMGIVEDKVIKNHFASEYIYNKY KHEKTCGVIERDESFGYERIAEPVGLLAGIVPVTNPTSTTIFKALITLKTRNGIIFSPHPRAKKCTIAAAKVVKEAAEAA GAPVGLIGWIDEPTIELSQALMQHPEVKLILATGGPGMVKAAYSSGHPSLGVGAGNTPAVIDASADIPMAVSSILLSKTF DNGMICASEQAVVVVDAIYEQVKAEFGHRGAYILDPEQIEAVRRILLKDGRLNPAIVGQSVQTIAALAGIQVPEGTKLLI GEVEKVGPEEPFSYEKLAPVLALYRANDFHSAVDVAVQLVNFGGRGHTSVLYTDPANRDDIAYFENALQTGRVLINTPSS QGAIGDLYNFKLDPSLTLGCGTWGGNSISENVGPRHLLNIKTVTQRRENMLWFRIPPKVYFKPGCLPIALRELAGKKRAF LVTDKPLFELGILHPITQVLDEIRVSWDVYHDVEPDPTLSNVNRGLEQLRQFQPDVIIAVGGGSPMDAAKVMWLMYEQPQ VEFEGLAMRFMDIRKRVYELPPLGQKAQLICIPTTSGTGSEVTPFAVVTDDRVGIKYPLADYALTPTMAIVDPDLTLKMP KKLTAYGGIDALTHALEAYVSVMASDFTDGLALQAIKLLMTYLPRAYEKGAEDPEAREKVHYAATIAGMAFANAFLGVCH SLAHKLGSTFHLPHGLANALMITHVIRYNATDAPFKQAIFPQYRYPNAKHRYAEIADYLQLGGADDDEKVMRLIEAIEEL KRKLGIPATIREALGEKEREFYDRLEAMAEQAFDDQCTGANPRYPLIQDMKELYVLAYRGCRVDSALYHQPEPVLA
Sequences:
>Translated_876_residues MPVTNLAELETLIQQVKAAQAEYATFTQEQVDRIFHKAALAANNERIPLAKLAVQETGMGIVEDKVIKNHFASEYIYNKY KHEKTCGVIERDESFGYERIAEPVGLLAGIVPVTNPTSTTIFKALITLKTRNGIIFSPHPRAKKCTIAAAKVVKEAAEAA GAPVGLIGWIDEPTIELSQALMQHPEVKLILATGGPGMVKAAYSSGHPSLGVGAGNTPAVIDASADIPMAVSSILLSKTF DNGMICASEQAVVVVDAIYEQVKAEFGHRGAYILDPEQIEAVRRILLKDGRLNPAIVGQSVQTIAALAGIQVPEGTKLLI GEVEKVGPEEPFSYEKLAPVLALYRANDFHSAVDVAVQLVNFGGRGHTSVLYTDPANRDDIAYFENALQTGRVLINTPSS QGAIGDLYNFKLDPSLTLGCGTWGGNSISENVGPRHLLNIKTVTQRRENMLWFRIPPKVYFKPGCLPIALRELAGKKRAF LVTDKPLFELGILHPITQVLDEIRVSWDVYHDVEPDPTLSNVNRGLEQLRQFQPDVIIAVGGGSPMDAAKVMWLMYEQPQ VEFEGLAMRFMDIRKRVYELPPLGQKAQLICIPTTSGTGSEVTPFAVVTDDRVGIKYPLADYALTPTMAIVDPDLTLKMP KKLTAYGGIDALTHALEAYVSVMASDFTDGLALQAIKLLMTYLPRAYEKGAEDPEAREKVHYAATIAGMAFANAFLGVCH SLAHKLGSTFHLPHGLANALMITHVIRYNATDAPFKQAIFPQYRYPNAKHRYAEIADYLQLGGADDDEKVMRLIEAIEEL KRKLGIPATIREALGEKEREFYDRLEAMAEQAFDDQCTGANPRYPLIQDMKELYVLAYRGCRVDSALYHQPEPVLA >Mature_875_residues PVTNLAELETLIQQVKAAQAEYATFTQEQVDRIFHKAALAANNERIPLAKLAVQETGMGIVEDKVIKNHFASEYIYNKYK HEKTCGVIERDESFGYERIAEPVGLLAGIVPVTNPTSTTIFKALITLKTRNGIIFSPHPRAKKCTIAAAKVVKEAAEAAG APVGLIGWIDEPTIELSQALMQHPEVKLILATGGPGMVKAAYSSGHPSLGVGAGNTPAVIDASADIPMAVSSILLSKTFD NGMICASEQAVVVVDAIYEQVKAEFGHRGAYILDPEQIEAVRRILLKDGRLNPAIVGQSVQTIAALAGIQVPEGTKLLIG EVEKVGPEEPFSYEKLAPVLALYRANDFHSAVDVAVQLVNFGGRGHTSVLYTDPANRDDIAYFENALQTGRVLINTPSSQ GAIGDLYNFKLDPSLTLGCGTWGGNSISENVGPRHLLNIKTVTQRRENMLWFRIPPKVYFKPGCLPIALRELAGKKRAFL VTDKPLFELGILHPITQVLDEIRVSWDVYHDVEPDPTLSNVNRGLEQLRQFQPDVIIAVGGGSPMDAAKVMWLMYEQPQV EFEGLAMRFMDIRKRVYELPPLGQKAQLICIPTTSGTGSEVTPFAVVTDDRVGIKYPLADYALTPTMAIVDPDLTLKMPK KLTAYGGIDALTHALEAYVSVMASDFTDGLALQAIKLLMTYLPRAYEKGAEDPEAREKVHYAATIAGMAFANAFLGVCHS LAHKLGSTFHLPHGLANALMITHVIRYNATDAPFKQAIFPQYRYPNAKHRYAEIADYLQLGGADDDEKVMRLIEAIEELK RKLGIPATIREALGEKEREFYDRLEAMAEQAFDDQCTGANPRYPLIQDMKELYVLAYRGCRVDSALYHQPEPVLA
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=353, Percent_Identity=28.8951841359773, Blast_Score=107, Evalue=7e-23, Organism=Escherichia coli, GI1787493, Length=865, Percent_Identity=63.9306358381503, Blast_Score=1115, Evalue=0.0, Organism=Escherichia coli, GI48994951, Length=411, Percent_Identity=37.2262773722628, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1789163, Length=384, Percent_Identity=33.8541666666667, Blast_Score=219, Evalue=5e-58, Organism=Escherichia coli, GI87082107, Length=407, Percent_Identity=33.1695331695332, Blast_Score=204, Evalue=2e-53, Organism=Escherichia coli, GI1788797, Length=365, Percent_Identity=34.2465753424658, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI1789386, Length=374, Percent_Identity=26.2032085561497, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537053, Length=397, Percent_Identity=26.1964735516373, Blast_Score=121, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6321181, Length=402, Percent_Identity=34.3283582089552, Blast_Score=221, Evalue=3e-58, Organism=Drosophila melanogaster, GI24657991, Length=432, Percent_Identity=27.7777777777778, Blast_Score=104, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 96075; Mature: 95944
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTNLAELETLIQQVKAAQAEYATFTQEQVDRIFHKAALAANNERIPLAKLAVQETGMG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC IVEDKVIKNHFASEYIYNKYKHEKTCGVIERDESFGYERIAEPVGLLAGIVPVTNPTSTT HHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHH IFKALITLKTRNGIIFSPHPRAKKCTIAAAKVVKEAAEAAGAPVGLIGWIDEPTIELSQA HHHHHHHEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH LMQHPEVKLILATGGPGMVKAAYSSGHPSLGVGAGNTPAVIDASADIPMAVSSILLSKTF HHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC DNGMICASEQAVVVVDAIYEQVKAEFGHRGAYILDPEQIEAVRRILLKDGRLNPAIVGQS CCCEEEECCCCEEEHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHCCH VQTIAALAGIQVPEGTKLLIGEVEKVGPEEPFSYEKLAPVLALYRANDFHSAVDVAVQLV HHHHHHHHCCCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH NFGGRGHTSVLYTDPANRDDIAYFENALQTGRVLINTPSSQGAIGDLYNFKLDPSLTLGC HCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCEEEEE GTWGGNSISENVGPRHLLNIKTVTQRRENMLWFRIPPKVYFKPGCLPIALRELAGKKRAF CCCCCCCCCCCCCCHHEEEHHHHHHHHHCEEEEECCCCEEECCCCHHHHHHHHCCCCEEE LVTDKPLFELGILHPITQVLDEIRVSWDVYHDVEPDPTLSNVNRGLEQLRQFQPDVIIAV EEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE GGGSPMDAAKVMWLMYEQPQVEFEGLAMRFMDIRKRVYELPPLGQKAQLICIPTTSGTGS CCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC EVTPFAVVTDDRVGIKYPLADYALTPTMAIVDPDLTLKMPKKLTAYGGIDALTHALEAYV CCCCEEEEECCCCCEECCCHHHHHCCEEEEECCCCEEECCCHHHHHCCHHHHHHHHHHHH SVMASDFTDGLALQAIKLLMTYLPRAYEKGAEDPEAREKVHYAATIAGMAFANAFLGVCH HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAHKLGSTFHLPHGLANALMITHVIRYNATDAPFKQAIFPQYRYPNAKHRYAEIADYLQ HHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHH LGGADDDEKVMRLIEAIEELKRKLGIPATIREALGEKEREFYDRLEAMAEQAFDDQCTGA CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC NPRYPLIQDMKELYVLAYRGCRVDSALYHQPEPVLA CCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC >Mature Secondary Structure PVTNLAELETLIQQVKAAQAEYATFTQEQVDRIFHKAALAANNERIPLAKLAVQETGMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC IVEDKVIKNHFASEYIYNKYKHEKTCGVIERDESFGYERIAEPVGLLAGIVPVTNPTSTT HHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHH IFKALITLKTRNGIIFSPHPRAKKCTIAAAKVVKEAAEAAGAPVGLIGWIDEPTIELSQA HHHHHHHEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH LMQHPEVKLILATGGPGMVKAAYSSGHPSLGVGAGNTPAVIDASADIPMAVSSILLSKTF HHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC DNGMICASEQAVVVVDAIYEQVKAEFGHRGAYILDPEQIEAVRRILLKDGRLNPAIVGQS CCCEEEECCCCEEEHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHCCH VQTIAALAGIQVPEGTKLLIGEVEKVGPEEPFSYEKLAPVLALYRANDFHSAVDVAVQLV HHHHHHHHCCCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH NFGGRGHTSVLYTDPANRDDIAYFENALQTGRVLINTPSSQGAIGDLYNFKLDPSLTLGC HCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCEEEEE GTWGGNSISENVGPRHLLNIKTVTQRRENMLWFRIPPKVYFKPGCLPIALRELAGKKRAF CCCCCCCCCCCCCCHHEEEHHHHHHHHHCEEEEECCCCEEECCCCHHHHHHHHCCCCEEE LVTDKPLFELGILHPITQVLDEIRVSWDVYHDVEPDPTLSNVNRGLEQLRQFQPDVIIAV EEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE GGGSPMDAAKVMWLMYEQPQVEFEGLAMRFMDIRKRVYELPPLGQKAQLICIPTTSGTGS CCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC EVTPFAVVTDDRVGIKYPLADYALTPTMAIVDPDLTLKMPKKLTAYGGIDALTHALEAYV CCCCEEEEECCCCCEECCCHHHHHCCEEEEECCCCEEECCCHHHHHCCHHHHHHHHHHHH SVMASDFTDGLALQAIKLLMTYLPRAYEKGAEDPEAREKVHYAATIAGMAFANAFLGVCH HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAHKLGSTFHLPHGLANALMITHVIRYNATDAPFKQAIFPQYRYPNAKHRYAEIADYLQ HHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHH LGGADDDEKVMRLIEAIEELKRKLGIPATIREALGEKEREFYDRLEAMAEQAFDDQCTGA CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC NPRYPLIQDMKELYVLAYRGCRVDSALYHQPEPVLA CCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]