| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ycbX [C]
Identifier: 86607622
GI number: 86607622
Start: 133034
End: 133855
Strand: Direct
Name: ycbX [C]
Synonym: CYB_0120
Alternate gene names: 86607622
Gene position: 133034-133855 (Clockwise)
Preceding gene: 86607621
Following gene: 86607623
Centisome position: 4.37
GC content: 61.44
Gene sequence:
>822_bases ATGCCCCAGGTTGCCAGGTTAACGGTCTATCCCATCAAGTCCCTGGATGGGATCCCTCTGTCTGAGGTGAGGCTGACGGC AGGGGGGACTTTGGAGGGGGATCGGCGCTACGCCCTGGTGGATGCGGAGGGGAAGCGGGTGAACGGCAAACGCCATGCTG CAGTCCACCGCCTGCGGGCCCGGTTTGATCCCCAGTTGGGCCAGGTGCAGTTGTGGGGGGATGGCAAGGCGGCTCAGTTT GACCTGCAGCAGCAGCGGGATGCTTTGCAGACTTGGCTCAGCGATTGGTTCGGTTTTCCGGTGCAACTGCTGGAGGAGCC TCTCAGGGGGTTTCCAGACGATCCCTATGCCGACGGCCCCACCCTGATCAGCACAGCCACTCTGGAGACGGTGGCCGGTT GGTTCCCCAACTTGACCCTGGAAGCGGTTCGGCAGCGCTTTCGCATGAATATCGAGCTGTCGGATTGCTCTGCCTTTTGG GAGGATCGTCTCTTTGCCCGCGCAGATCAAGGGGTGCGCTTTCGCATTGGGGAAGTGGAGCTGCTGGGCCTCAACCCCTG CGCCCGCTGTGTGGTGCCCAGCCGGGATCCCCTGAGCGGAGAGGCCTATCCCGGTTTTCAAAAGCACTTCGTAGCGCAAC GGCAGAAAACCTTGCCACCCTGGGCCGAAGCCAGCCGCTTTGACCATTTCTATCGCCTTGGAATCAATACGTGGATCCCG AGAACGGAGACGGGCAAGCACCTGAGGGTTGGGGATCCCGTCGAAATCCTCGGGGTTGAACCCCTCAGCCTCTACCCTGA GCTGAGTCGAATCCCAGGTTAG
Upstream 100 bases:
>100_bases AAATGTAACCCCCAGAGACTTTATCCGCAGCTACCCCATGACCGACCATCCCACCGAAGCCGACAGTTAAGCAATTCAGG CGGAGCCCGGCAGACAGGCC
Downstream 100 bases:
>100_bases TTTCCGACCTACAATCAAGCTAGAGCAGCTCTTTTGGCTTGACCAAGCTATGCAAACCCTGGATCGGCCCAACGCCCCCA CCCAGCAGCCCTACCCAGAA
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: MOSC Domain-Containing Protein; MOSC Domain Protein Beta Barrel Domain Protein; Fe-S Protein-Like Protein; Mosc Domain Protein; MOSC N-Terminal Beta Barrel Domain Family Protein; MOSC Protein
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPQVARLTVYPIKSLDGIPLSEVRLTAGGTLEGDRRYALVDAEGKRVNGKRHAAVHRLRARFDPQLGQVQLWGDGKAAQF DLQQQRDALQTWLSDWFGFPVQLLEEPLRGFPDDPYADGPTLISTATLETVAGWFPNLTLEAVRQRFRMNIELSDCSAFW EDRLFARADQGVRFRIGEVELLGLNPCARCVVPSRDPLSGEAYPGFQKHFVAQRQKTLPPWAEASRFDHFYRLGINTWIP RTETGKHLRVGDPVEILGVEPLSLYPELSRIPG
Sequences:
>Translated_273_residues MPQVARLTVYPIKSLDGIPLSEVRLTAGGTLEGDRRYALVDAEGKRVNGKRHAAVHRLRARFDPQLGQVQLWGDGKAAQF DLQQQRDALQTWLSDWFGFPVQLLEEPLRGFPDDPYADGPTLISTATLETVAGWFPNLTLEAVRQRFRMNIELSDCSAFW EDRLFARADQGVRFRIGEVELLGLNPCARCVVPSRDPLSGEAYPGFQKHFVAQRQKTLPPWAEASRFDHFYRLGINTWIP RTETGKHLRVGDPVEILGVEPLSLYPELSRIPG >Mature_272_residues PQVARLTVYPIKSLDGIPLSEVRLTAGGTLEGDRRYALVDAEGKRVNGKRHAAVHRLRARFDPQLGQVQLWGDGKAAQFD LQQQRDALQTWLSDWFGFPVQLLEEPLRGFPDDPYADGPTLISTATLETVAGWFPNLTLEAVRQRFRMNIELSDCSAFWE DRLFARADQGVRFRIGEVELLGLNPCARCVVPSRDPLSGEAYPGFQKHFVAQRQKTLPPWAEASRFDHFYRLGINTWIPR TETGKHLRVGDPVEILGVEPLSLYPELSRIPG
Specific function: Unknown
COG id: COG3217
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30832; Mature: 30701
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVARLTVYPIKSLDGIPLSEVRLTAGGTLEGDRRYALVDAEGKRVNGKRHAAVHRLRA CCCCEEEEEEECCCCCCCCHHHEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH RFDPQLGQVQLWGDGKAAQFDLQQQRDALQTWLSDWFGFPVQLLEEPLRGFPDDPYADGP HCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC TLISTATLETVAGWFPNLTLEAVRQRFRMNIELSDCSAFWEDRLFARADQGVRFRIGEVE CEEEHHHHHHHHHHCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCEEEECCEE LLGLNPCARCVVPSRDPLSGEAYPGFQKHFVAQRQKTLPPWAEASRFDHFYRLGINTWIP EEECCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECCHHCCC RTETGKHLRVGDPVEILGVEPLSLYPELSRIPG CCCCCCEEECCCCEEEEECCCHHHCCHHHCCCC >Mature Secondary Structure PQVARLTVYPIKSLDGIPLSEVRLTAGGTLEGDRRYALVDAEGKRVNGKRHAAVHRLRA CCCEEEEEEECCCCCCCCHHHEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH RFDPQLGQVQLWGDGKAAQFDLQQQRDALQTWLSDWFGFPVQLLEEPLRGFPDDPYADGP HCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC TLISTATLETVAGWFPNLTLEAVRQRFRMNIELSDCSAFWEDRLFARADQGVRFRIGEVE CEEEHHHHHHHHHHCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCEEEECCEE LLGLNPCARCVVPSRDPLSGEAYPGFQKHFVAQRQKTLPPWAEASRFDHFYRLGINTWIP EEECCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECCHHCCC RTETGKHLRVGDPVEILGVEPLSLYPELSRIPG CCCCCCEEECCCCEEEEECCCHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA