Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607621

Identifier: 86607621

GI number: 86607621

Start: 132488

End: 133003

Strand: Direct

Name: 86607621

Synonym: CYB_0119

Alternate gene names: NA

Gene position: 132488-133003 (Clockwise)

Preceding gene: 86607619

Following gene: 86607622

Centisome position: 4.35

GC content: 56.98

Gene sequence:

>516_bases
ATGATCGAGATGCATGTGGCTGGGATTGCGGTCGATGCCGTCAACCAAAACCCCATTGTCATCCTGCGCGATGGCAGTGA
GCGTCGTGCCCTGCCCATTTGGGTGGGAAAAGCAGAGGCCAACGCCATTTTGCAGGCCCTGGACGACCAAAAGCCACTGC
GCCCCATGACCCATGATCTCATCCTCAACTCCTGGAAGACGTGGGGGATCAAGCTGGAGCGAGTCATCATTCACGCGTTG
CTGGATAACACCTTCTACGCGGTGCTCGTCACCGTGAATGGTGACAAAAAACAAGAGATCGACTGCCGCCCCAGCGACGC
CATTGCCCTCGCTCTGCGGGCCCATGTTCCCATCTGGACGGTGGAAGAGGTCATTGCGGAAGCCTCGATCCCCATGAACC
AAGATGCCGACGAAGCAGAGCGGGAGGCCTTTCGCAAGTTTGTAGAAAATGTAACCCCCAGAGACTTTATCCGCAGCTAC
CCCATGACCGACCATCCCACCGAAGCCGACAGTTAA

Upstream 100 bases:

>100_bases
CAAAGCCACTTCAACTGGACTACCAACTGAGCTCATGGTGTGTTGCCAAACTTTGACGCCCGTAGATACGATCAAGATCA
CCGGCTGGAGGCAATTGCTC

Downstream 100 bases:

>100_bases
GCAATTCAGGCGGAGCCCGGCAGACAGGCCATGCCCCAGGTTGCCAGGTTAACGGTCTATCCCATCAAGTCCCTGGATGG
GATCCCTCTGTCTGAGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDLILNSWKTWGIKLERVIIHAL
LDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWTVEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSY
PMTDHPTEADS

Sequences:

>Translated_171_residues
MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDLILNSWKTWGIKLERVIIHAL
LDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWTVEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSY
PMTDHPTEADS
>Mature_171_residues
MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDLILNSWKTWGIKLERVIIHAL
LDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWTVEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSY
PMTDHPTEADS

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 19260; Mature: 19260

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDL
CEEEEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHH
ILNSWKTWGIKLERVIIHALLDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWT
HHHCCHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEH
VEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSYPMTDHPTEADS
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDL
CEEEEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHH
ILNSWKTWGIKLERVIIHALLDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWT
HHHCCHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEH
VEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSYPMTDHPTEADS
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]