| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is hisD [H]
Identifier: 86607575
GI number: 86607575
Start: 84796
End: 86109
Strand: Direct
Name: hisD [H]
Synonym: CYB_0073
Alternate gene names: 86607575
Gene position: 84796-86109 (Clockwise)
Preceding gene: 86607574
Following gene: 86607576
Centisome position: 2.78
GC content: 62.63
Gene sequence:
>1314_bases ATGCTGAGAATCGTCACCCAGCTAGCCGAGGCTGAAGCCGAGCTCAGACGGATCTCGGAGCGCACTCAGGCTGACCAGAA CCTGCACCGCGAAGCAACTGTGCGGGAGATCCTGCAAGCGGTACGCCGTCAGGGGGATCGGGCCCTGCTGACCTATACGG CTGAGTTCGACCAGGTGGAGCTGAGCGTTGCCGAGCTGAAGGTGTCTGGGGCCGAGCTAGAGGCAGCTTACCAGGCGGTA TCTCCGCAATTGCTTTCAGCCCTACGGCTGGCCAAGCAGCGCATTGAAGCTTTTCACCGGCAGCGGGTGCCCAGCAGTTG GGTAAGCTTTCCCGGCCCTGAGATCGTCTTGGGCAAGCAATACCGCCCTGTGGATCGCGCCGGCCTCTACATTCCGGGAG GGCGAGCCGCCTATCCCAGCACGGTGTTGATGAACGCCATCCCGGCCCAGGTGGCAGGGGTGCCCGAGATTGTGATGGTG ACGCCACCGGGATCTGACGGGTTGGGGGGCAAGGGGATTAGCCCGGCCATTTTGGTGGCCGCCCAAGAAGTAGGCATCCA CACCATCTATCGCGTTGGGGGGGCTCAGGCAATAGGGGCTTTGGCCTACGGCACCGAGACCATCCCCAAGGTGGACGTGA TCACCGGCCCCGGCAACATCTACGTAACTTTGGCCAAAAAGCTGGTGTACGGCACGGTGGGGATCGACTCGCTGGCCGGG CCATCGGAGGTGTTGATCATCGCCGACGAGAGCGCCAACCCCCTTTATGTGGCTGCCGATTTGCTGGCCCAAGCCGAGCA CGATCCCTTGGCGGCGGCCATCCTTCTGACCACCGATCTCCAGCTGGCCCAGCAGGTGCAGCAGGCGGTGGCCACCCAGA TGGAGGCCCATCCCAACCGTCTGATGGTGGAAAAGTCGGTGGTGAATTACGGGCTGATTGCGGTGGTGCCGGATCTGACG GCGGCGGTGGCTTTGTCCAACCTGTTTGCGCCAGAGCATTTGGAACTGCAGGTGGCAGATCCCTGGGCTTTGCTGGATCC CATTCGCCATGCGGGGGCCATTTTCTTGGGCCACCATACTCCGGAGGCGGTAGGAGATTACCTGGCCGGCCCCAACCATA CCTTGCCCACCGCCGGTGCGGCCCGCTATGCCTCGGCTTTGGGGGTGGAAACTTTCCTAAAGCATTCCAGTCTGATTCAA TACAGCTCAGCGGCTTTGCGGGAGGTGGCCAGCGCCATTCAGGCTCTCACACAAGCGGAAGGGTTGCCCGCCCACGGCCA GTCGGTACAGGTGCGGTTGGCGGAGGAGCGCTAA
Upstream 100 bases:
>100_bases TCGCCGCAAGCCGACCCAGCGAAAGATCCGCTTTGCTACCGCGATGCCGCCGGATCCCTCGTTACTATGGGGTTGCGGCA CTCTACGCGAAGGAGTCGCT
Downstream 100 bases:
>100_bases TCAAGCCCTGGTCGCAGTTAGCTAGACCGCCGGGAAGCCCCACCCTCTGTTAGTGACTAGTGGCTAGTCACTATCCACTC ACCACTATCCAGGGTGAGGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 2 [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MLRIVTQLAEAEAELRRISERTQADQNLHREATVREILQAVRRQGDRALLTYTAEFDQVELSVAELKVSGAELEAAYQAV SPQLLSALRLAKQRIEAFHRQRVPSSWVSFPGPEIVLGKQYRPVDRAGLYIPGGRAAYPSTVLMNAIPAQVAGVPEIVMV TPPGSDGLGGKGISPAILVAAQEVGIHTIYRVGGAQAIGALAYGTETIPKVDVITGPGNIYVTLAKKLVYGTVGIDSLAG PSEVLIIADESANPLYVAADLLAQAEHDPLAAAILLTTDLQLAQQVQQAVATQMEAHPNRLMVEKSVVNYGLIAVVPDLT AAVALSNLFAPEHLELQVADPWALLDPIRHAGAIFLGHHTPEAVGDYLAGPNHTLPTAGAARYASALGVETFLKHSSLIQ YSSAALREVASAIQALTQAEGLPAHGQSVQVRLAEER
Sequences:
>Translated_437_residues MLRIVTQLAEAEAELRRISERTQADQNLHREATVREILQAVRRQGDRALLTYTAEFDQVELSVAELKVSGAELEAAYQAV SPQLLSALRLAKQRIEAFHRQRVPSSWVSFPGPEIVLGKQYRPVDRAGLYIPGGRAAYPSTVLMNAIPAQVAGVPEIVMV TPPGSDGLGGKGISPAILVAAQEVGIHTIYRVGGAQAIGALAYGTETIPKVDVITGPGNIYVTLAKKLVYGTVGIDSLAG PSEVLIIADESANPLYVAADLLAQAEHDPLAAAILLTTDLQLAQQVQQAVATQMEAHPNRLMVEKSVVNYGLIAVVPDLT AAVALSNLFAPEHLELQVADPWALLDPIRHAGAIFLGHHTPEAVGDYLAGPNHTLPTAGAARYASALGVETFLKHSSLIQ YSSAALREVASAIQALTQAEGLPAHGQSVQVRLAEER >Mature_437_residues MLRIVTQLAEAEAELRRISERTQADQNLHREATVREILQAVRRQGDRALLTYTAEFDQVELSVAELKVSGAELEAAYQAV SPQLLSALRLAKQRIEAFHRQRVPSSWVSFPGPEIVLGKQYRPVDRAGLYIPGGRAAYPSTVLMNAIPAQVAGVPEIVMV TPPGSDGLGGKGISPAILVAAQEVGIHTIYRVGGAQAIGALAYGTETIPKVDVITGPGNIYVTLAKKLVYGTVGIDSLAG PSEVLIIADESANPLYVAADLLAQAEHDPLAAAILLTTDLQLAQQVQQAVATQMEAHPNRLMVEKSVVNYGLIAVVPDLT AAVALSNLFAPEHLELQVADPWALLDPIRHAGAIFLGHHTPEAVGDYLAGPNHTLPTAGAARYASALGVETFLKHSSLIQ YSSAALREVASAIQALTQAEGLPAHGQSVQVRLAEER
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=405, Percent_Identity=43.2098765432099, Blast_Score=295, Evalue=5e-81, Organism=Saccharomyces cerevisiae, GI6319819, Length=429, Percent_Identity=39.1608391608392, Blast_Score=278, Evalue=8e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46426; Mature: 46426
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIVTQLAEAEAELRRISERTQADQNLHREATVREILQAVRRQGDRALLTYTAEFDQVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHE LSVAELKVSGAELEAAYQAVSPQLLSALRLAKQRIEAFHRQRVPSSWVSFPGPEIVLGKQ EEHHHEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCC YRPVDRAGLYIPGGRAAYPSTVLMNAIPAQVAGVPEIVMVTPPGSDGLGGKGISPAILVA CCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEE AQEVGIHTIYRVGGAQAIGALAYGTETIPKVDVITGPGNIYVTLAKKLVYGTVGIDSLAG HHHCCHHHEEECCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEHHHHHHCCCCCCCCC PSEVLIIADESANPLYVAADLLAQAEHDPLAAAILLTTDLQLAQQVQQAVATQMEAHPNR CCEEEEEECCCCCCEEEHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC LMVEKSVVNYGLIAVVPDLTAAVALSNLFAPEHLELQVADPWALLDPIRHAGAIFLGHHT EEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCEEEEECCC PEAVGDYLAGPNHTLPTAGAARYASALGVETFLKHSSLIQYSSAALREVASAIQALTQAE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPAHGQSVQVRLAEER CCCCCCCEEEEEEECCC >Mature Secondary Structure MLRIVTQLAEAEAELRRISERTQADQNLHREATVREILQAVRRQGDRALLTYTAEFDQVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHE LSVAELKVSGAELEAAYQAVSPQLLSALRLAKQRIEAFHRQRVPSSWVSFPGPEIVLGKQ EEHHHEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCC YRPVDRAGLYIPGGRAAYPSTVLMNAIPAQVAGVPEIVMVTPPGSDGLGGKGISPAILVA CCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEE AQEVGIHTIYRVGGAQAIGALAYGTETIPKVDVITGPGNIYVTLAKKLVYGTVGIDSLAG HHHCCHHHEEECCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEHHHHHHCCCCCCCCC PSEVLIIADESANPLYVAADLLAQAEHDPLAAAILLTTDLQLAQQVQQAVATQMEAHPNR CCEEEEEECCCCCCEEEHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC LMVEKSVVNYGLIAVVPDLTAAVALSNLFAPEHLELQVADPWALLDPIRHAGAIFLGHHT EEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCEEEEECCC PEAVGDYLAGPNHTLPTAGAARYASALGVETFLKHSSLIQYSSAALREVASAIQALTQAE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPAHGQSVQVRLAEER CCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA