| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607574
Identifier: 86607574
GI number: 86607574
Start: 83850
End: 84548
Strand: Direct
Name: 86607574
Synonym: CYB_0072
Alternate gene names: NA
Gene position: 83850-84548 (Clockwise)
Preceding gene: 86607573
Following gene: 86607575
Centisome position: 2.75
GC content: 57.22
Gene sequence:
>699_bases ATGGGGGTGGCGCTCTTGAGTCGGGCAGGTCGCCCTTTCTTCTACCGCTCTTTTCAGGATTTGGATAGCCGACAGCAACA GGCCCTCACCGAAGGGCTGTTTCAAGTTTTGCAGACCATGCCCCCAGGACTTGACTATTTTGATTTTCAGTTTGCCGAGC AGCGGGTCTTCGTTTACCCCCTCGGGCCGGAATGGGCGTTGCTGGTGGCGGTGAATGACGAGCTGGTGATGCCGGTTTAC ACCTTGGCCGTGAACCGCCTGCGAGCCGAGCTGCAGCAGGATACGCCAAAGGGCTTGGCCACCTTTCGTCTATTTACCAG CCAGGCGGAGGCAGGCCGGAACGCTACCCAGCCCAGTTCCGCTCCTGCGGCGGGCCCGCGCATGGAGATGGATGTCTTCG TGCAATCTCTGAACCGTCTCTGCCAGATTACAACCGGCTATTTGGGCAAGGCGGTGATCGTCAACTATTGGAAGGCAGCA CGGCAGGAAGTGGTGGAACGCCAGGGATCCAAAGCAGAATGGCTGAACCAGTTCGAGATCGAGCGCAGTGGCCAGATCCA CTACCGGGGATCCCTCAAGGAACTGGACGAATCTCAGCAAAGGGTGCTACGGGATTGGGTGCTGGCTTTTTTCCGTCGCT GTGAAGAGGTAATCCACGATTTTCGCAACTTGATCAAATCGACAGAACTGGGCCTATGA
Upstream 100 bases:
>100_bases CGTCGGGCAATCTAAGTCAGGATAAGAGTAAGAGTGTTATCCAAGTTGAGTGGGCATGGAGAAGGAAACGCTCGACAGTT TTTTGTCCATCCGTGGGGTG
Downstream 100 bases:
>100_bases AAAAGGGGCAGGCTTTTTCCTAAGTAGGGCTATCGGCGAACTCTACCCGGCTCTTGGTCGAGGAAAATCCAGGCTAAGCT ATGACCATGATCAACCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MGVALLSRAGRPFFYRSFQDLDSRQQQALTEGLFQVLQTMPPGLDYFDFQFAEQRVFVYPLGPEWALLVAVNDELVMPVY TLAVNRLRAELQQDTPKGLATFRLFTSQAEAGRNATQPSSAPAAGPRMEMDVFVQSLNRLCQITTGYLGKAVIVNYWKAA RQEVVERQGSKAEWLNQFEIERSGQIHYRGSLKELDESQQRVLRDWVLAFFRRCEEVIHDFRNLIKSTELGL
Sequences:
>Translated_232_residues MGVALLSRAGRPFFYRSFQDLDSRQQQALTEGLFQVLQTMPPGLDYFDFQFAEQRVFVYPLGPEWALLVAVNDELVMPVY TLAVNRLRAELQQDTPKGLATFRLFTSQAEAGRNATQPSSAPAAGPRMEMDVFVQSLNRLCQITTGYLGKAVIVNYWKAA RQEVVERQGSKAEWLNQFEIERSGQIHYRGSLKELDESQQRVLRDWVLAFFRRCEEVIHDFRNLIKSTELGL >Mature_231_residues GVALLSRAGRPFFYRSFQDLDSRQQQALTEGLFQVLQTMPPGLDYFDFQFAEQRVFVYPLGPEWALLVAVNDELVMPVYT LAVNRLRAELQQDTPKGLATFRLFTSQAEAGRNATQPSSAPAAGPRMEMDVFVQSLNRLCQITTGYLGKAVIVNYWKAAR QEVVERQGSKAEWLNQFEIERSGQIHYRGSLKELDESQQRVLRDWVLAFFRRCEEVIHDFRNLIKSTELGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26616; Mature: 26484
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVALLSRAGRPFFYRSFQDLDSRQQQALTEGLFQVLQTMPPGLDYFDFQFAEQRVFVYP CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEE LGPEWALLVAVNDELVMPVYTLAVNRLRAELQQDTPKGLATFRLFTSQAEAGRNATQPSS CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC APAAGPRMEMDVFVQSLNRLCQITTGYLGKAVIVNYWKAARQEVVERQGSKAEWLNQFEI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ERSGQIHYRGSLKELDESQQRVLRDWVLAFFRRCEEVIHDFRNLIKSTELGL CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GVALLSRAGRPFFYRSFQDLDSRQQQALTEGLFQVLQTMPPGLDYFDFQFAEQRVFVYP CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEE LGPEWALLVAVNDELVMPVYTLAVNRLRAELQQDTPKGLATFRLFTSQAEAGRNATQPSS CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC APAAGPRMEMDVFVQSLNRLCQITTGYLGKAVIVNYWKAARQEVVERQGSKAEWLNQFEI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ERSGQIHYRGSLKELDESQQRVLRDWVLAFFRRCEEVIHDFRNLIKSTELGL CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA