Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606818

Identifier: 86606818

GI number: 86606818

Start: 2193986

End: 2195272

Strand: Reverse

Name: 86606818

Synonym: CYA_2178

Alternate gene names: NA

Gene position: 2195272-2193986 (Counterclockwise)

Preceding gene: 86606819

Following gene: 86606816

Centisome position: 74.85

GC content: 60.76

Gene sequence:

>1287_bases
ATGACTGCTGTCTCGAGCGCCCAAGCTGCCGCCGTGCGCAACTATGCCCTGGTAACGGCTGCCTACTGGGGCTTTACCCT
CACCGACGGCGCCATCCGCATGTTGGTGCTGCTCCACTTCCACAAGTTGGGCTTCACCCCGATTCAGATTGCCATGCTGT
TTCTCTTCTACGAGATCTTTGGGGTGATCACCAACTTTCTGGGCGGCTGGATTGGATCCCTGTTTGGCCTGCGGCTGACG
CTGTACGGGGGCATCGCCATCCAGATCTTCGGCTTGGTGATGCTGGGGGTGATCAACCTGCAATGGCCGGTCTGGGGCCA
GGTGGCCTATGTGATGACGGCCCAAGCCCTGGCCGGGATCGCCAAAGATCTCACCAAGATGAGCTCCAAAAGCGCCATCC
GCCTGGTGGTGCCCAAGGAGGCCGAGTCCCGCCTCTTCCGCTGGGTGGCCATGCTGACGGGATCCAAAAACGCCCTCAAG
GGGGTAGGGTTTTTCGTCGGGGCGGCCCTGCTGCAGATCTTCACTGAGATCTACGGGGATCCCATGGGCTTCCGCATGGC
CAATTTCGTCCAGGCGGGGGCGCTGGCTTTGATCTTCTGTTCCGGGATCCTGCTGCCGGCGGACATGGGCAAGGTCAAGG
CCAAGATCCCCTTCAAGCGGCTGTTTTCCAAAAGCCGCGAGATCAACCTCCTCTCAGCCGCCCGCTTTTTCCTCTTTGGG
TCGCGCGATGTGTGGTTTGTGGTGGCCCTGCCGGTGTTCCTCTACGACAGCCTAGGCTGGAGCTTTATGCAGGTGGGCAG
CTACATGGCCCTCTGGGTCATTGGCTATGGGATCATCCAGTTCCTAGCGCCCCAGCTCCTGGGAGGAGGTCGCCCGGGTC
GCGCCCCCAAGGCCCGCACCATCCAGATCTGGACGTTCACCTTGACGGCGGTGCCGGCACTCATTGCTACCGCTTTTATG
GCCGGCCTGCCGCCGCAATGGGTGGTTACCGGCGGCCTCATCCTCTTCGGGATCGTCTTTGCCTTCAACTCGGCGGTGCA
CTCCTATCTGGTACTGGCCTACACAGAGGATGACGATGTCGCCCTCAACGTGGGCTTTTACTACATGGCCAACTCCGGTG
GGCGCCTGCTGGGGACGGTGACTTCGGGGATCCTCTTCCAGCTTTACGGTCTGGAGGGCTGCCTCTGGTTTTCCACCCTG
TTGATTTTGATGGCAGGGCTGTTTTCGCTGAAATTGCCCGATCCCAGCAAAACCCCCGTGGAGTGGGTGGTTAAGCCGGG
GGATTGA

Upstream 100 bases:

>100_bases
AACGAATGGGGCTACGCCAACCGCATGGCGGAATTGGCCCGCAAGGTGGCCCTCAGTTTATAGAAGCGTTTTTTGAAGCA
TCCCCCTTGGAGGCCTGCCC

Downstream 100 bases:

>100_bases
GGTGTTAGTCAAGCAGGGCCAGGTTATCCCGGTGAACCGCTGTATCGACTCCCTCGTAGCCCAAGATGTAGGGGATCTCG
GCGGTTTTCTTGCCTTTGAT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTAVSSAQAAAVRNYALVTAAYWGFTLTDGAIRMLVLLHFHKLGFTPIQIAMLFLFYEIFGVITNFLGGWIGSLFGLRLT
LYGGIAIQIFGLVMLGVINLQWPVWGQVAYVMTAQALAGIAKDLTKMSSKSAIRLVVPKEAESRLFRWVAMLTGSKNALK
GVGFFVGAALLQIFTEIYGDPMGFRMANFVQAGALALIFCSGILLPADMGKVKAKIPFKRLFSKSREINLLSAARFFLFG
SRDVWFVVALPVFLYDSLGWSFMQVGSYMALWVIGYGIIQFLAPQLLGGGRPGRAPKARTIQIWTFTLTAVPALIATAFM
AGLPPQWVVTGGLILFGIVFAFNSAVHSYLVLAYTEDDDVALNVGFYYMANSGGRLLGTVTSGILFQLYGLEGCLWFSTL
LILMAGLFSLKLPDPSKTPVEWVVKPGD

Sequences:

>Translated_428_residues
MTAVSSAQAAAVRNYALVTAAYWGFTLTDGAIRMLVLLHFHKLGFTPIQIAMLFLFYEIFGVITNFLGGWIGSLFGLRLT
LYGGIAIQIFGLVMLGVINLQWPVWGQVAYVMTAQALAGIAKDLTKMSSKSAIRLVVPKEAESRLFRWVAMLTGSKNALK
GVGFFVGAALLQIFTEIYGDPMGFRMANFVQAGALALIFCSGILLPADMGKVKAKIPFKRLFSKSREINLLSAARFFLFG
SRDVWFVVALPVFLYDSLGWSFMQVGSYMALWVIGYGIIQFLAPQLLGGGRPGRAPKARTIQIWTFTLTAVPALIATAFM
AGLPPQWVVTGGLILFGIVFAFNSAVHSYLVLAYTEDDDVALNVGFYYMANSGGRLLGTVTSGILFQLYGLEGCLWFSTL
LILMAGLFSLKLPDPSKTPVEWVVKPGD
>Mature_427_residues
TAVSSAQAAAVRNYALVTAAYWGFTLTDGAIRMLVLLHFHKLGFTPIQIAMLFLFYEIFGVITNFLGGWIGSLFGLRLTL
YGGIAIQIFGLVMLGVINLQWPVWGQVAYVMTAQALAGIAKDLTKMSSKSAIRLVVPKEAESRLFRWVAMLTGSKNALKG
VGFFVGAALLQIFTEIYGDPMGFRMANFVQAGALALIFCSGILLPADMGKVKAKIPFKRLFSKSREINLLSAARFFLFGS
RDVWFVVALPVFLYDSLGWSFMQVGSYMALWVIGYGIIQFLAPQLLGGGRPGRAPKARTIQIWTFTLTAVPALIATAFMA
GLPPQWVVTGGLILFGIVFAFNSAVHSYLVLAYTEDDDVALNVGFYYMANSGGRLLGTVTSGILFQLYGLEGCLWFSTLL
ILMAGLFSLKLPDPSKTPVEWVVKPGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46670; Mature: 46539

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVSSAQAAAVRNYALVTAAYWGFTLTDGAIRMLVLLHFHKLGFTPIQIAMLFLFYEIF
CCCCCCHHHHHHHHHHHEEHHHCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GVITNFLGGWIGSLFGLRLTLYGGIAIQIFGLVMLGVINLQWPVWGQVAYVMTAQALAGI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AKDLTKMSSKSAIRLVVPKEAESRLFRWVAMLTGSKNALKGVGFFVGAALLQIFTEIYGD
HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PMGFRMANFVQAGALALIFCSGILLPADMGKVKAKIPFKRLFSKSREINLLSAARFFLFG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHCCCCCCCHHHHHHHHEEC
SRDVWFVVALPVFLYDSLGWSFMQVGSYMALWVIGYGIIQFLAPQLLGGGRPGRAPKART
CCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
IQIWTFTLTAVPALIATAFMAGLPPQWVVTGGLILFGIVFAFNSAVHSYLVLAYTEDDDV
EEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCE
ALNVGFYYMANSGGRLLGTVTSGILFQLYGLEGCLWFSTLLILMAGLFSLKLPDPSKTPV
EEEEEEEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCC
EWVVKPGD
EEEECCCC
>Mature Secondary Structure 
TAVSSAQAAAVRNYALVTAAYWGFTLTDGAIRMLVLLHFHKLGFTPIQIAMLFLFYEIF
CCCCCHHHHHHHHHHHEEHHHCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GVITNFLGGWIGSLFGLRLTLYGGIAIQIFGLVMLGVINLQWPVWGQVAYVMTAQALAGI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AKDLTKMSSKSAIRLVVPKEAESRLFRWVAMLTGSKNALKGVGFFVGAALLQIFTEIYGD
HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PMGFRMANFVQAGALALIFCSGILLPADMGKVKAKIPFKRLFSKSREINLLSAARFFLFG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHCCCCCCCHHHHHHHHEEC
SRDVWFVVALPVFLYDSLGWSFMQVGSYMALWVIGYGIIQFLAPQLLGGGRPGRAPKART
CCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
IQIWTFTLTAVPALIATAFMAGLPPQWVVTGGLILFGIVFAFNSAVHSYLVLAYTEDDDV
EEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCE
ALNVGFYYMANSGGRLLGTVTSGILFQLYGLEGCLWFSTLLILMAGLFSLKLPDPSKTPV
EEEEEEEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCC
EWVVKPGD
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA