| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606720
Identifier: 86606720
GI number: 86606720
Start: 2100756
End: 2101133
Strand: Reverse
Name: 86606720
Synonym: CYA_2080
Alternate gene names: NA
Gene position: 2101133-2100756 (Counterclockwise)
Preceding gene: 86606721
Following gene: 86606718
Centisome position: 71.64
GC content: 58.99
Gene sequence:
>378_bases GTGGTACACTACCGCTACGGTGAGTTGGTCAGATTGATGGCAGGGATCCCTCATTTCTATTGGCGTTGGGCTAGGTGGGC TACACCGGCTCTGTGGGCGTTGCTGCTGTCGCCTGCTCCTATGGCTTGGGCTTCTGCTCTGGAGGTGCCTCAATTTGATC TGAGTGTTGTCCGCTCTCGTTCTTTGCCGTGGCGGCACCCGCTCCCTTGGCCAGAGATAGGGGATCCCAACCCATCTGAA GCTGAGGTCGAGGCGGCGGAGCATCTTTTCTTGGAGTTCACCCTCGAAGAGAGCAACGCCGCCATTGCCCTGTTCGGGTG TGATTGCCCAGCCCATATCAACCAACTGCGACGACTGCGCGGCCTGCCCTTGCTGTGA
Upstream 100 bases:
>100_bases TGCTATTGTACCCCTTGAGTCCTTAACAGGCTGTAAGCTCAACCACTTTACGGTCATTTCGGCTGATGGAGTTTCTCTTT CCTGACAGAAGCCAAAACCA
Downstream 100 bases:
>100_bases ACGGGGGAGAGCTGACGGCCCCTCTGAACAGCACAGTTTGTATATTGCTAAGGCTGAGGTTCTCCCCCTGCTCAGTAGCC TGCTTCCGCGCTTCAGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVHYRYGELVRLMAGIPHFYWRWARWATPALWALLLSPAPMAWASALEVPQFDLSVVRSRSLPWRHPLPWPEIGDPNPSE AEVEAAEHLFLEFTLEESNAAIALFGCDCPAHINQLRRLRGLPLL
Sequences:
>Translated_125_residues MVHYRYGELVRLMAGIPHFYWRWARWATPALWALLLSPAPMAWASALEVPQFDLSVVRSRSLPWRHPLPWPEIGDPNPSE AEVEAAEHLFLEFTLEESNAAIALFGCDCPAHINQLRRLRGLPLL >Mature_125_residues MVHYRYGELVRLMAGIPHFYWRWARWATPALWALLLSPAPMAWASALEVPQFDLSVVRSRSLPWRHPLPWPEIGDPNPSE AEVEAAEHLFLEFTLEESNAAIALFGCDCPAHINQLRRLRGLPLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14324; Mature: 14324
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHYRYGELVRLMAGIPHFYWRWARWATPALWALLLSPAPMAWASALEVPQFDLSVVRSR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC SLPWRHPLPWPEIGDPNPSEAEVEAAEHLFLEFTLEESNAAIALFGCDCPAHINQLRRLR CCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHC GLPLL CCCCC >Mature Secondary Structure MVHYRYGELVRLMAGIPHFYWRWARWATPALWALLLSPAPMAWASALEVPQFDLSVVRSR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC SLPWRHPLPWPEIGDPNPSEAEVEAAEHLFLEFTLEESNAAIALFGCDCPAHINQLRRLR CCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHC GLPLL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA