| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606716
Identifier: 86606716
GI number: 86606716
Start: 2095714
End: 2096265
Strand: Reverse
Name: 86606716
Synonym: CYA_2076
Alternate gene names: NA
Gene position: 2096265-2095714 (Counterclockwise)
Preceding gene: 86606717
Following gene: 86606713
Centisome position: 71.48
GC content: 67.39
Gene sequence:
>552_bases ATGGGCTGGCCTGAGGTCATCCAGCGCCTGGCAGGGCTGTTGCTGGTCACGGGGTTGGGGCTGTTTTTGTTCTGGCCACA ACAGCTCCTGCTGCGCTACCGCAAGCCTTGGCAGGGCCCCCTCGCCTGGGTTGGGGAATGGCGCGGGTGGAGGGGCTTGG CTCTGCGGGGCAGCCGTCGGGGTTGGGAATGGCGCTGCGGGTCCCTATACGTTCGCGGGCATTGGCCAGCCTGGGTGGGC TGCCGTCTCTCCTTTGCCGACTGGCCTCGCTTCTGGCCCCTTCTGAGGCGGTTGGCCGAGGGGATCCAGATCCAGTCCTG GCGAGGCGGCCTGGAAATCGGCTTTGCCGACCCGGCCTTGACGGGGCAGTGCCTAGGGCTTTTGGCAACCCTCCCCCCCT CGCTGGCTTGCCACCTGCGCTTGACCTTCGCCCACACCGGCTGGCACGGACAGGGATCCCTGCTGCTTTGCTTTCGCGCC TGGCGAGTGCTGGGGCCGGCCTTGGAATTGGCATGGCTCATCCTGCGCAGCAGCCGCTCGAGGATCCGATAG
Upstream 100 bases:
>100_bases CGCATTGAATTTCAGGTGAAGATCACGCAGCAGGGGCGCTTGGTCATGCAGGGATCCTATACCTGTCAGGTGGTCGATTT GCCCCGTTTTCTGGCTCGCT
Downstream 100 bases:
>100_bases AACTCGTCAGCCCTCTCTTGGGCTCTTGCAGCAGCCCAACTACCAGTCATCATCGATGTCTAGAATTTTCCCGGCTCTGC CATCGATTTTGACCTCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MGWPEVIQRLAGLLLVTGLGLFLFWPQQLLLRYRKPWQGPLAWVGEWRGWRGLALRGSRRGWEWRCGSLYVRGHWPAWVG CRLSFADWPRFWPLLRRLAEGIQIQSWRGGLEIGFADPALTGQCLGLLATLPPSLACHLRLTFAHTGWHGQGSLLLCFRA WRVLGPALELAWLILRSSRSRIR
Sequences:
>Translated_183_residues MGWPEVIQRLAGLLLVTGLGLFLFWPQQLLLRYRKPWQGPLAWVGEWRGWRGLALRGSRRGWEWRCGSLYVRGHWPAWVG CRLSFADWPRFWPLLRRLAEGIQIQSWRGGLEIGFADPALTGQCLGLLATLPPSLACHLRLTFAHTGWHGQGSLLLCFRA WRVLGPALELAWLILRSSRSRIR >Mature_182_residues GWPEVIQRLAGLLLVTGLGLFLFWPQQLLLRYRKPWQGPLAWVGEWRGWRGLALRGSRRGWEWRCGSLYVRGHWPAWVGC RLSFADWPRFWPLLRRLAEGIQIQSWRGGLEIGFADPALTGQCLGLLATLPPSLACHLRLTFAHTGWHGQGSLLLCFRAW RVLGPALELAWLILRSSRSRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21043; Mature: 20912
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWPEVIQRLAGLLLVTGLGLFLFWPQQLLLRYRKPWQGPLAWVGEWRGWRGLALRGSRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEECCCC GWEWRCGSLYVRGHWPAWVGCRLSFADWPRFWPLLRRLAEGIQIQSWRGGLEIGFADPAL CCCEECCEEEEEECCCCEEEEEECHHCCHHHHHHHHHHHCCCEEEECCCCEEEECCCCCH TGQCLGLLATLPPSLACHLRLTFAHTGWHGQGSLLLCFRAWRVLGPALELAWLILRSSRS HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RIR CCC >Mature Secondary Structure GWPEVIQRLAGLLLVTGLGLFLFWPQQLLLRYRKPWQGPLAWVGEWRGWRGLALRGSRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEECCCC GWEWRCGSLYVRGHWPAWVGCRLSFADWPRFWPLLRRLAEGIQIQSWRGGLEIGFADPAL CCCEECCEEEEEECCCCEEEEEECHHCCHHHHHHHHHHHCCCEEEECCCCEEEECCCCCH TGQCLGLLATLPPSLACHLRLTFAHTGWHGQGSLLLCFRAWRVLGPALELAWLILRSSRS HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RIR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA