| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is ilvB
Identifier: 86606713
GI number: 86606713
Start: 2093190
End: 2094986
Strand: Reverse
Name: ilvB
Synonym: CYA_2073
Alternate gene names: 86606713
Gene position: 2094986-2093190 (Counterclockwise)
Preceding gene: 86606716
Following gene: 86606703
Centisome position: 71.43
GC content: 62.77
Gene sequence:
>1797_bases GTGGCAACAGGGGCCTATGCACTGGTGGATAGCCTGCATCGACATGGGGTGCAGCACATTTTCGGCTATCCAGGAGGAGC GATCTTGCCCATCTACGACGAGCTGTACAAGGCCGAATCCCAAGGGCTACTCAAACATTTCCTAGTCCGCCACGAACAGG CCGCTGCCCATGCTGCCGATGGCTACGCCCGCGCTACCGGCAAGGTGGGGGTGTGCTTTGCCACCTCGGGGCCGGGGGCA ACCAATTTGGTGACAGGCATCGCCAACGCCATAATGGACTCCGTGCCTCTGGTGGCCATTACTGGCCAGGTGCCCCGCCA TTTGATTGGTACTGATGGCTTTCAGGAGACTGACATTTTTGGCATCACCCTGCCCATTGTCAAACACTCCTACGTGGTGC GCGACCCCCGGCAGATGGCCCGGATTGTGGCCGAGGCCTTCCACATCGCCAGCACGGGGCGACCCGGTCCAGTGTTGATC GACATCCCCAAAGATGTGGGCCTGGAAGAGTTCGACTACCAGCCGGTCAGCGAGGTCAATATCCCCGGCTACCGGCCCAC GGTGCGGGGCAACCCTCGCCAGATCCACGCGGCGGCCAAGCTGATCCTGCAGGCCAAGCGGCCCCTGCTCTACGTGGGGG GCGGGGCCATCATCTCGGGTGCCCATGCCGAGATTGCCGAGCTGGCCCACACCTATCAGATCCCGGTGACCACCACCCTC ATGGGCAAAGGGGCCTTCGATGAGAACGATCCCCTCTCGGTGGGGATGCTGGGCATGCACGGCACCGCCTACGCCAACTT CGCCGTTACCGAGTGCGACCTGCTGATTGCCGTGGGGGCCCGCTTTGACGACCGCGTAACCGGCAAGCTGGACGAATTTG CCAAGCACGCCAAGGTTATCCACATTGATATCGACCCGGCAGAAGTGGGCAAAAACCGCACTCCGGACGTGCCGATTGTG GGAGATGTGCGCACCGTCCTGGTGGAGCTGTTGGCGCAACTGAGCAAAATGCCCCACACCCCTGGCCAGACGCAGGCTTG GCTGGAGCGGATCGAGCGCTGGAAACGGGACTACCCCCTGCAGGTGCCCCGCTATGAGGGCGTGATCGCCCCGCAGCAGG TGATCGATGCCTTTCGTCGCCATGCTCCCCACGCCTACTACACCACCGATGTCGGTCAGCACCAAATGTGGGCGGCGCAG TTTCTGCGTAACGGGCCGCGCCAGTGGATCTCCAGTTCTGGCCTGGGCACCATGGGCTACGGTTTCCCGGCGGCCATGGG GGTCAAAGTGGCCCTGCCCCACGCCGAGGTGATCTGCATCAGCGGCGACGCCAGCTTCCAGATGAACATGCAGGAGCTGG GCACGGTGGCCCAGTACGGCATTGCCACCAAGGTGGCCATCATCAACAACGGCTGGCAGGGCATGGTGCGGCAGTGGCAG CAGGCTTTCCACGGCGAGCGCTACTCCCACTCGGATATGACTCCGGGCATGCCGGATTTCGTCAAGCTGGCTGAAGCCTT TGGCGTCAAGGGCATGCGCGTCGATCACCCCGATCAAGTGGACGACGCCATCCAAGAGATGCTGCGCCACGAGGGGCCGG TGGTGGTCGATTTTGTGGTCAAGCGGGACGAGAACTGCTACCCGATGGTGCCCGCCGGCAAAGCCAACTACCAGATGATC GGCCTGCCGGAAAAGCGGCAACTGGAGCAAGCCGCCGAGCTGATTTACTGCCCCAATTGCGGCACCAAAAACCCCAGCCT GCACAAGTTCTGCGCCGAGTGCGGCACCAAGCTCTAG
Upstream 100 bases:
>100_bases TTAAATACACAACCTAAAAAGCCGGCCAATAGCTGGCTGGTCTTCTAGCTCAAACCCTTCAGGTTGAGCGCTCGGTCGTC TTCAGTGGGGAGAAGATATC
Downstream 100 bases:
>100_bases AACCGGCAGGGCTGGCCATCAGGGCAGGGAAGTTGGGATCCCTTCGCAACAAGGCCCGCCCTCGGCAGCGGAAAGTCCGC AGGGATGCCGATGATGGCTA
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MATGAYALVDSLHRHGVQHIFGYPGGAILPIYDELYKAESQGLLKHFLVRHEQAAAHAADGYARATGKVGVCFATSGPGA TNLVTGIANAIMDSVPLVAITGQVPRHLIGTDGFQETDIFGITLPIVKHSYVVRDPRQMARIVAEAFHIASTGRPGPVLI DIPKDVGLEEFDYQPVSEVNIPGYRPTVRGNPRQIHAAAKLILQAKRPLLYVGGGAIISGAHAEIAELAHTYQIPVTTTL MGKGAFDENDPLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDEFAKHAKVIHIDIDPAEVGKNRTPDVPIV GDVRTVLVELLAQLSKMPHTPGQTQAWLERIERWKRDYPLQVPRYEGVIAPQQVIDAFRRHAPHAYYTTDVGQHQMWAAQ FLRNGPRQWISSSGLGTMGYGFPAAMGVKVALPHAEVICISGDASFQMNMQELGTVAQYGIATKVAIINNGWQGMVRQWQ QAFHGERYSHSDMTPGMPDFVKLAEAFGVKGMRVDHPDQVDDAIQEMLRHEGPVVVDFVVKRDENCYPMVPAGKANYQMI GLPEKRQLEQAAELIYCPNCGTKNPSLHKFCAECGTKL
Sequences:
>Translated_598_residues MATGAYALVDSLHRHGVQHIFGYPGGAILPIYDELYKAESQGLLKHFLVRHEQAAAHAADGYARATGKVGVCFATSGPGA TNLVTGIANAIMDSVPLVAITGQVPRHLIGTDGFQETDIFGITLPIVKHSYVVRDPRQMARIVAEAFHIASTGRPGPVLI DIPKDVGLEEFDYQPVSEVNIPGYRPTVRGNPRQIHAAAKLILQAKRPLLYVGGGAIISGAHAEIAELAHTYQIPVTTTL MGKGAFDENDPLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDEFAKHAKVIHIDIDPAEVGKNRTPDVPIV GDVRTVLVELLAQLSKMPHTPGQTQAWLERIERWKRDYPLQVPRYEGVIAPQQVIDAFRRHAPHAYYTTDVGQHQMWAAQ FLRNGPRQWISSSGLGTMGYGFPAAMGVKVALPHAEVICISGDASFQMNMQELGTVAQYGIATKVAIINNGWQGMVRQWQ QAFHGERYSHSDMTPGMPDFVKLAEAFGVKGMRVDHPDQVDDAIQEMLRHEGPVVVDFVVKRDENCYPMVPAGKANYQMI GLPEKRQLEQAAELIYCPNCGTKNPSLHKFCAECGTKL >Mature_597_residues ATGAYALVDSLHRHGVQHIFGYPGGAILPIYDELYKAESQGLLKHFLVRHEQAAAHAADGYARATGKVGVCFATSGPGAT NLVTGIANAIMDSVPLVAITGQVPRHLIGTDGFQETDIFGITLPIVKHSYVVRDPRQMARIVAEAFHIASTGRPGPVLID IPKDVGLEEFDYQPVSEVNIPGYRPTVRGNPRQIHAAAKLILQAKRPLLYVGGGAIISGAHAEIAELAHTYQIPVTTTLM GKGAFDENDPLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDEFAKHAKVIHIDIDPAEVGKNRTPDVPIVG DVRTVLVELLAQLSKMPHTPGQTQAWLERIERWKRDYPLQVPRYEGVIAPQQVIDAFRRHAPHAYYTTDVGQHQMWAAQF LRNGPRQWISSSGLGTMGYGFPAAMGVKVALPHAEVICISGDASFQMNMQELGTVAQYGIATKVAIINNGWQGMVRQWQQ AFHGERYSHSDMTPGMPDFVKLAEAFGVKGMRVDHPDQVDDAIQEMLRHEGPVVVDFVVKRDENCYPMVPAGKANYQMIG LPEKRQLEQAAELIYCPNCGTKNPSLHKFCAECGTKL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=545, Percent_Identity=26.4220183486239, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI21361361, Length=591, Percent_Identity=26.5651438240271, Blast_Score=162, Evalue=8e-40, Organism=Escherichia coli, GI87081685, Length=558, Percent_Identity=46.9534050179211, Blast_Score=506, Evalue=1e-144, Organism=Escherichia coli, GI1790104, Length=561, Percent_Identity=42.9590017825312, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1786717, Length=554, Percent_Identity=34.8375451263538, Blast_Score=336, Evalue=2e-93, Organism=Escherichia coli, GI1787096, Length=558, Percent_Identity=29.7491039426523, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1788716, Length=554, Percent_Identity=25.812274368231, Blast_Score=172, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17531301, Length=585, Percent_Identity=26.6666666666667, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17531299, Length=585, Percent_Identity=26.6666666666667, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17542570, Length=601, Percent_Identity=25.6239600665557, Blast_Score=145, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6323755, Length=599, Percent_Identity=42.0701168614357, Blast_Score=444, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6320816, Length=510, Percent_Identity=26.2745098039216, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6323163, Length=524, Percent_Identity=23.6641221374046, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323073, Length=543, Percent_Identity=23.2044198895028, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI19922626, Length=550, Percent_Identity=27.2727272727273, Blast_Score=171, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 65341; Mature: 65210
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGAYALVDSLHRHGVQHIFGYPGGAILPIYDELYKAESQGLLKHFLVRHEQAAAHAAD CCCCHHHHHHHHHHCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYARATGKVGVCFATSGPGATNLVTGIANAIMDSVPLVAITGQVPRHLIGTDGFQETDIF CHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCEE GITLPIVKHSYVVRDPRQMARIVAEAFHIASTGRPGPVLIDIPKDVGLEEFDYQPVSEVN EEEEHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCC IPGYRPTVRGNPRQIHAAAKLILQAKRPLLYVGGGAIISGAHAEIAELAHTYQIPVTTTL CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHEECCEEEEE MGKGAFDENDPLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDEFAKHAKVI EECCCCCCCCCCEEEEEECCCCEEECEEEECCEEEEEECCCCCCCCCCCHHHHHHCCEEE HIDIDPAEVGKNRTPDVPIVGDVRTVLVELLAQLSKMPHTPGQTQAWLERIERWKRDYPL EEECCHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC QVPRYEGVIAPQQVIDAFRRHAPHAYYTTDVGQHQMWAAQFLRNGPRQWISSSGLGTMGY CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCC GFPAAMGVKVALPHAEVICISGDASFQMNMQELGTVAQYGIATKVAIINNGWQGMVRQWQ CCHHHCCEEEECCCCEEEEEECCCCEEECHHHHHHHHHHCCEEEEEEEECCHHHHHHHHH QAFHGERYSHSDMTPGMPDFVKLAEAFGVKGMRVDHPDQVDDAIQEMLRHEGPVVVDFVV HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE KRDENCYPMVPAGKANYQMIGLPEKRQLEQAAELIYCPNCGTKNPSLHKFCAECGTKL ECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure ATGAYALVDSLHRHGVQHIFGYPGGAILPIYDELYKAESQGLLKHFLVRHEQAAAHAAD CCCHHHHHHHHHHCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYARATGKVGVCFATSGPGATNLVTGIANAIMDSVPLVAITGQVPRHLIGTDGFQETDIF CHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCEE GITLPIVKHSYVVRDPRQMARIVAEAFHIASTGRPGPVLIDIPKDVGLEEFDYQPVSEVN EEEEHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCC IPGYRPTVRGNPRQIHAAAKLILQAKRPLLYVGGGAIISGAHAEIAELAHTYQIPVTTTL CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHEECCEEEEE MGKGAFDENDPLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDEFAKHAKVI EECCCCCCCCCCEEEEEECCCCEEECEEEECCEEEEEECCCCCCCCCCCHHHHHHCCEEE HIDIDPAEVGKNRTPDVPIVGDVRTVLVELLAQLSKMPHTPGQTQAWLERIERWKRDYPL EEECCHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC QVPRYEGVIAPQQVIDAFRRHAPHAYYTTDVGQHQMWAAQFLRNGPRQWISSSGLGTMGY CCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCC GFPAAMGVKVALPHAEVICISGDASFQMNMQELGTVAQYGIATKVAIINNGWQGMVRQWQ CCHHHCCEEEECCCCEEEEEECCCCEEECHHHHHHHHHHCCEEEEEEEECCHHHHHHHHH QAFHGERYSHSDMTPGMPDFVKLAEAFGVKGMRVDHPDQVDDAIQEMLRHEGPVVVDFVV HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE KRDENCYPMVPAGKANYQMIGLPEKRQLEQAAELIYCPNCGTKNPSLHKFCAECGTKL ECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]