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The map label for this gene is cpcE-2

Identifier: 86606680

GI number: 86606680

Start: 2060229

End: 2061056

Strand: Reverse

Name: cpcE-2

Synonym: CYA_2040

Alternate gene names: 86606680

Gene position: 2061056-2060229 (Counterclockwise)

Preceding gene: 86606681

Following gene: 86606679

Centisome position: 70.28

GC content: 65.46

Gene sequence:

>828_bases
ATGACCACGGCTGTTCCTTCAGATCTCCCTCCGGCCGCCGACCTCACCCCCGCTGGCCAGATCGCCAAGCTGCGCCATGG
GGATCCGGGGGAACGTTACTACGCGGCTTGGTGGCTGGGGCGCATGCGCATCCCCGAAGGGATCCCGGCCCTGATCGAAG
CCTTGGCCGATGAGACAGATCGCACCACGCAGGGGGGATATCCGCTGCGGCGCAACGCCGCCCGTGCCCTGGGCAAGGTG
GCCTCCCCTGCTGGGATCCCGGCTCTGAAAGAGGCTTTACGCTGCTCCGATGGCCAAGTGGTGGCAGCAGCAGCCCAGGC
GCTGGTGGAGATCGCCCTAGCCAATAATCTGGATCGGGATCCCAGGCAAGCCGAAGAGCTGGGAGTGGCGTTGCTCGAAG
GGCTGCGCTGGGTGGAGCAGGGTCTGCAGACAGAAGCGCCTGCCGCCTTGGAGGCTTTGATCGAGGCGCTTGGACAGTTG
CAGGTGGCTGCCGCCCTGGGGCAGATCCGCCCTTACCTAGAGCACCCCTCAATTCGCCTCCAATGCGCGGCAGCGCGGGC
CTGTTACCGGCTGACAGGGGATCCCAGTTTTGTCCAACCGCTACTGTCGGTGTTGAGCCACCCCAACATCCATCTGCGGC
GGGCTGCCCTGCTGGATCTGGGGGCCAGCGGCTATCTGCCGGCGGCCCAAGCCATGGCAGCGGCAGCGGTGGAGGCCAAT
ATCAAGCTGCTCGCCCTCAAGCAGTTGGTGGAGCTGAACCTCAGACGGGGAAAAGAGGCCGGCACCGACCTGCACCAGGT
GCTACGGCTAATCGACGAGCTGCTCTAA

Upstream 100 bases:

>100_bases
AGCTCTCGGCGACGATGCAGCGGCTGCTCAAGTCGGGCGCCAAGATCGTCAGCGTCCGCAGCGCTTGAGGCCTCTGCAGG
CGCTCTGGCCTGTTGATGCT

Downstream 100 bases:

>100_bases
TTCTCTGGATAGGGAGACGACCTCGACCCAAAGTTGACACCCAACTGCTTATTTTGTTAATTTCGATACAGAATAAAATT
GGGTTTTACCCTCTGAGCTG

Product: phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit

Products: NA

Alternate protein names: Phycocyanin operon protein CpcE [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTTAVPSDLPPAADLTPAGQIAKLRHGDPGERYYAAWWLGRMRIPEGIPALIEALADETDRTTQGGYPLRRNAARALGKV
ASPAGIPALKEALRCSDGQVVAAAAQALVEIALANNLDRDPRQAEELGVALLEGLRWVEQGLQTEAPAALEALIEALGQL
QVAAALGQIRPYLEHPSIRLQCAAARACYRLTGDPSFVQPLLSVLSHPNIHLRRAALLDLGASGYLPAAQAMAAAAVEAN
IKLLALKQLVELNLRRGKEAGTDLHQVLRLIDELL

Sequences:

>Translated_275_residues
MTTAVPSDLPPAADLTPAGQIAKLRHGDPGERYYAAWWLGRMRIPEGIPALIEALADETDRTTQGGYPLRRNAARALGKV
ASPAGIPALKEALRCSDGQVVAAAAQALVEIALANNLDRDPRQAEELGVALLEGLRWVEQGLQTEAPAALEALIEALGQL
QVAAALGQIRPYLEHPSIRLQCAAARACYRLTGDPSFVQPLLSVLSHPNIHLRRAALLDLGASGYLPAAQAMAAAAVEAN
IKLLALKQLVELNLRRGKEAGTDLHQVLRLIDELL
>Mature_274_residues
TTAVPSDLPPAADLTPAGQIAKLRHGDPGERYYAAWWLGRMRIPEGIPALIEALADETDRTTQGGYPLRRNAARALGKVA
SPAGIPALKEALRCSDGQVVAAAAQALVEIALANNLDRDPRQAEELGVALLEGLRWVEQGLQTEAPAALEALIEALGQLQ
VAAALGQIRPYLEHPSIRLQCAAARACYRLTGDPSFVQPLLSVLSHPNIHLRRAALLDLGASGYLPAAQAMAAAAVEANI
KLLALKQLVELNLRRGKEAGTDLHQVLRLIDELL

Specific function: Required for the chromophorylation of the CpcA gene product [H]

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: 4.-.-.-

Molecular weight: Translated: 29312; Mature: 29181

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAVPSDLPPAADLTPAGQIAKLRHGDPGERYYAAWWLGRMRIPEGIPALIEALADETD
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHCCCC
RTTQGGYPLRRNAARALGKVASPAGIPALKEALRCSDGQVVAAAAQALVEIALANNLDRD
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PRQAEELGVALLEGLRWVEQGLQTEAPAALEALIEALGQLQVAAALGQIRPYLEHPSIRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
QCAAARACYRLTGDPSFVQPLLSVLSHPNIHLRRAALLDLGASGYLPAAQAMAAAAVEAN
EHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
IKLLALKQLVELNLRRGKEAGTDLHQVLRLIDELL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
TTAVPSDLPPAADLTPAGQIAKLRHGDPGERYYAAWWLGRMRIPEGIPALIEALADETD
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHCCCC
RTTQGGYPLRRNAARALGKVASPAGIPALKEALRCSDGQVVAAAAQALVEIALANNLDRD
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PRQAEELGVALLEGLRWVEQGLQTEAPAALEALIEALGQLQVAAALGQIRPYLEHPSIRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
QCAAARACYRLTGDPSFVQPLLSVLSHPNIHLRRAALLDLGASGYLPAAQAMAAAAVEAN
EHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
IKLLALKQLVELNLRRGKEAGTDLHQVLRLIDELL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]