Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606679

Identifier: 86606679

GI number: 86606679

Start: 2059650

End: 2060015

Strand: Reverse

Name: 86606679

Synonym: CYA_2039

Alternate gene names: NA

Gene position: 2060015-2059650 (Counterclockwise)

Preceding gene: 86606680

Following gene: 86606678

Centisome position: 70.24

GC content: 63.66

Gene sequence:

>366_bases
ATGCAACTGACCTACCGGGGCATTGCCCACGACTTTGTCCCTTCTGCCCCCGCAACCTGCCAGCGGCAGGAGGTGCCAAC
GCGCTACCGGGGCCTGGCGTGGAGCTGGCCAGCCCAATCGGCGGTTGTGTCGCTGCCACAGTTTTCTGCCTTGAGGTATC
GAGGCCTTGTCCTCAATCCGGCGGCGAAGGCAGCGAGCAGGGTGCCGGCGGCTATTTCCCCGCGCAAGGACTTTATAACC
TTGGTCGAAGAAACCCATCGGCAAAACCTGCTGCGGCGACTACAAGAGCGCATTCGCGCTGCCCAGGCCCGCGGCGACGA
GCATCTGTTGCGGCAACTGGAGCAGGAGCGACAACTGCTGGCCTGA

Upstream 100 bases:

>100_bases
GAAGCTGTTGTCTAACGGCTCTCAACAAGCTGGCTCAGGGGCGTCGCTTTCTTCCTCAGCTCTTTAAAGATCGCCGCAGT
CTATTTGGGGGAGTCTTCCT

Downstream 100 bases:

>100_bases
GCTCTGCCTTGCCCTCCCTCCAGAGGTCGGGAGAATCCGGGATAATGGTGCTGCCCTATGCCGAAGCGAGGGGGGTAGCG
GCTGTGAGCCTGTGGGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQLTYRGIAHDFVPSAPATCQRQEVPTRYRGLAWSWPAQSAVVSLPQFSALRYRGLVLNPAAKAASRVPAAISPRKDFIT
LVEETHRQNLLRRLQERIRAAQARGDEHLLRQLEQERQLLA

Sequences:

>Translated_121_residues
MQLTYRGIAHDFVPSAPATCQRQEVPTRYRGLAWSWPAQSAVVSLPQFSALRYRGLVLNPAAKAASRVPAAISPRKDFIT
LVEETHRQNLLRRLQERIRAAQARGDEHLLRQLEQERQLLA
>Mature_121_residues
MQLTYRGIAHDFVPSAPATCQRQEVPTRYRGLAWSWPAQSAVVSLPQFSALRYRGLVLNPAAKAASRVPAAISPRKDFIT
LVEETHRQNLLRRLQERIRAAQARGDEHLLRQLEQERQLLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13782; Mature: 13782

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTYRGIAHDFVPSAPATCQRQEVPTRYRGLAWSWPAQSAVVSLPQFSALRYRGLVLNP
CCCCCCCHHHHHCCCCCCCCCHHCCCHHHCCCCCCCCCHHHHHCCCHHHHHHHCCEEECH
AAKAASRVPAAISPRKDFITLVEETHRQNLLRRLQERIRAAQARGDEHLLRQLEQERQLL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure
MQLTYRGIAHDFVPSAPATCQRQEVPTRYRGLAWSWPAQSAVVSLPQFSALRYRGLVLNP
CCCCCCCHHHHHCCCCCCCCCHHCCCHHHCCCCCCCCCHHHHHCCCHHHHHHHCCEEECH
AAKAASRVPAAISPRKDFITLVEETHRQNLLRRLQERIRAAQARGDEHLLRQLEQERQLL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA