Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is mviN

Identifier: 86606678

GI number: 86606678

Start: 2057850

End: 2059484

Strand: Reverse

Name: mviN

Synonym: CYA_2038

Alternate gene names: 86606678

Gene position: 2059484-2057850 (Counterclockwise)

Preceding gene: 86606679

Following gene: 86606676

Centisome position: 70.22

GC content: 64.46

Gene sequence:

>1635_bases
ATGAAAGAGTCTGCCCCGCGAATCCCATCCGCCGCGTCTTCTCCACCCCGTTCCTTGCTCTCGGTAGCAGGGCTGGTGGC
AGGGGCCACGCTGCTCAGCAAGGGCATGGGGTTTATCCGTCAGGCCCTAATCGCGGCAGTCTACGGCTCGGGGACAGAGT
ACAGCGCCTTTAGCATAGCCTATGTCCTGCCTGGCTTTTTGTTGATCTTGCTGGGCGGGATCAACGGCCCCTTTCACAGC
GCCATCGTCAGCGTGCTCAAAAAGCAGCAGCCGGGAAGAGAGGATCCGGCCCGTTGGCTAGAGTCCATTTCTACCTTGGT
GGGCTGCCTGCTCTTAGCGGTGACGTTGGGCCTCTGGTGGGGAGCCGACTGGGTGGTGCGCCTGAGCGCACCAGGGGCCA
GCCCCGAAGTGCATGCTCTTGCCGCCGAGCAGTTGCGGATCATGGCGCCGCTGGCCTTGCTCTCGGGCTGGATTGGCATT
GGCTTTGGGGCGCTGAATGCGGCCGAGCACTACCTCTTGCCCGCCCTTAGCCCGTTGATCTCCAGCTTGTCAGTCATTGG
GATCCTGCTCGCGTTGGGATGGACGGGGATCCCGACGTTGCTGGCCTGGGGGGTGCTCATCGGGGCCATCGCCCAGTGGT
TGGCGCAGGTGCCGCTGCAGCAGCGGCTGGGGCTGGGGCGGCTGCGGCTGCGCTTTGAGTGGGGATCCCCGCCGGTGCGG
GCGGTGGGCCTGCTGCTGTTGCCGGCGGTGATCTCCTCCGGCATGATCCACATCAATGTCTATGTGGATCTCTTTTTTGC
CTCCTTCGTGCCCGGGGATCGCACCATCGGCAACTTGGGCTATGCCCAGCTTTTGGTGCAAACCCCCCTGGGGATCCTCT
CCAACATGGTGCTGGTGCCCCTGATGCCTCTCTACGCCCAGCTGGCGGGGGATGGATCCCGCTGGCCGGAGCTGCGCCAG
CGTATCCGCCAAGGGCTGATGGTGACGGCCATCCTCACCCTGCCCCTGGCGATGGTGCTGGTGGCCCTGGCCGAACCTAT
CGTTCAAGTAGCCTACCAGCGCGGTCGCTTTACGCCGGAGGTGACCCAGGAGGTGGCGGCCCTGCTGATGGCTTATGGGC
TGGGGATGACCTGTTACCTGCTGCGGGATGTGCTGGTGCGTATCTTCTACGCCCTGGAGGATGGGGCTACGCCCCTGCAC
ATCAGCGGCCTGGCCATCGGCCTCAACGCCCTGCTGGACTTCCTGTTTTTGCCAACCTTTGGAGCACCGGGCATTGCCTT
GGCCACGGCAGGCGTTAACCTGATGGCTCTGATTGGGCTGGGGATCCGCCTCCACCAGCGCTTGCCGGAGATCCCCTGGC
AGGAGATGGGGCAGGCCCTGCTGCCGTTGCTGGGGATCACCGCCTTGGCCGGGGGCCTCAGCCATTGGCTGTGGACGCAA
CTGCGCTCCCACGAGATTCTCGGCTCTTCTCTAATCACCGCCGCCCTCTGGGCCGGTCTGGCCGCCGGCATCGGTCTCAG
CTTGTTTGCGGCAGGGGCCCTGTATCTGCGGATCCCGGAAGTGAACTGGCTGGCAGCCCAGATCCAGACGCGCCTGAGCA
AGATTGCCAGCCAGCGATCTCCATCCAGATCCTAG

Upstream 100 bases:

>100_bases
GCGAGGGGGGTAGCGGCTGTGAGCCTGTGGGTGAATCCTGGGAAGATTAGGGCATCCCGACAGTTGCCCATTGCCAAGGC
GGCGGTGGGGAGCTAGGGGT

Downstream 100 bases:

>100_bases
GCAGGCCCGACTAGCTGATGGCTTCGAGGTAGTCTCGCACTCGGTTGCGCCGCTTCGGCTGCCGCAGCTTTTGCAGGGCT
TTGGCCTCGATTTGCCGTAC

Product: integral membrane protein MviN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIAYVLPGFLLILLGGINGPFHS
AIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWWGADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGI
GFGALNAAEHYLLPALSPLISSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR
AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVPLMPLYAQLAGDGSRWPELRQ
RIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPEVTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLH
ISGLAIGLNALLDFLFLPTFGAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ
LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRSPSRS

Sequences:

>Translated_544_residues
MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIAYVLPGFLLILLGGINGPFHS
AIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWWGADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGI
GFGALNAAEHYLLPALSPLISSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR
AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVPLMPLYAQLAGDGSRWPELRQ
RIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPEVTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLH
ISGLAIGLNALLDFLFLPTFGAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ
LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRSPSRS
>Mature_544_residues
MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIAYVLPGFLLILLGGINGPFHS
AIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWWGADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGI
GFGALNAAEHYLLPALSPLISSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR
AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVPLMPLYAQLAGDGSRWPELRQ
RIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPEVTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLH
ISGLAIGLNALLDFLFLPTFGAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ
LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRSPSRS

Specific function: Unknown

COG id: COG0728

COG function: function code R; Uncharacterized membrane protein, putative virulence factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mviN family [H]

Homologues:

Organism=Escherichia coli, GI1787309, Length=453, Percent_Identity=27.3730684326711, Blast_Score=133, Evalue=4e-32,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004268 [H]

Pfam domain/function: PF03023 MVIN [H]

EC number: NA

Molecular weight: Translated: 57833; Mature: 57833

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
YVLPGFLLILLGGINGPFHSAIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWW
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGIGFGALNAAEHYLLPALSPLI
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCHHH
AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVP
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LMPLYAQLAGDGSRWPELRQRIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLHISGLAIGLNALLDFLFLPTF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCC
GAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
PSRS
CCCC
>Mature Secondary Structure
MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
YVLPGFLLILLGGINGPFHSAIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWW
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGIGFGALNAAEHYLLPALSPLI
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCHHH
AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVP
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LMPLYAQLAGDGSRWPELRQRIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLHISGLAIGLNALLDFLFLPTF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCC
GAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
PSRS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]