Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606676

Identifier: 86606676

GI number: 86606676

Start: 2055623

End: 2056153

Strand: Reverse

Name: 86606676

Synonym: CYA_2036

Alternate gene names: NA

Gene position: 2056153-2055623 (Counterclockwise)

Preceding gene: 86606678

Following gene: 86606674

Centisome position: 70.11

GC content: 64.22

Gene sequence:

>531_bases
TTGCAAGGGGAGACAATTTCAACGCTACTGCTTACGGTCTTGCTGGCCATCGGCCTGTTCTTTTTTCTGCGAGCCTCTGG
CAAAGACCGCGTCGAAGCTCGTCTCTATTTTAGCAGTCGCAACCTGGAAGAAATGGGATCCCTTCTCCGAAAGCACCTGG
AGGGGCGCGCCTATCGCTTGCAATCTGCTGACCCGGAGGGGATCGCCACCTTTGTGGGTCAGGCGCGGGCCAGTGTGGGG
TTGGCTGTTTTTTTGACGGGGCTGGCGGGGGCAGGGCTGGCCTGTTTGGCCCTGGTGCTGCAGATGCTGCAGCCGGCTTG
GGGAGCCTGGCCTTGGACGCTGCTGCTGGCCTCTCCTTGGGCGGGCTGGTACTACTGGCGGCGCAGCCACCGCCCGCAGC
AGATCCGCCTGAAGCTGCAAGAGGCCGCTCCGCCCCCCGGATCCCACCTCTGGGTGGAGGGGCAGCGGGAGGAGCTGGAG
GTGCTGGCCGCCACCTTGGGGCTGGAAGAACGGGATCCGGAGCGAGGATAG

Upstream 100 bases:

>100_bases
TTCTTTCTGGTCAGGAGAGAAAGCCCCGATCGCAGTTGCGCTGCCCATCAACTTTGGCTCTCTATCCGAGGCACGTGCGG
CAGTAGCCGCCTCTTCTTCC

Downstream 100 bases:

>100_bases
ACCTAGAGCTCCTCGGGGTAGAGGGAGGTCGGGATCAGGGATAGTTGATCCCCAGCCTTGGCATCGCAGTCGGGTATCCC
GCGGGAATTGGATTCTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MQGETISTLLLTVLLAIGLFFFLRASGKDRVEARLYFSSRNLEEMGSLLRKHLEGRAYRLQSADPEGIATFVGQARASVG
LAVFLTGLAGAGLACLALVLQMLQPAWGAWPWTLLLASPWAGWYYWRRSHRPQQIRLKLQEAAPPPGSHLWVEGQREELE
VLAATLGLEERDPERG

Sequences:

>Translated_176_residues
MQGETISTLLLTVLLAIGLFFFLRASGKDRVEARLYFSSRNLEEMGSLLRKHLEGRAYRLQSADPEGIATFVGQARASVG
LAVFLTGLAGAGLACLALVLQMLQPAWGAWPWTLLLASPWAGWYYWRRSHRPQQIRLKLQEAAPPPGSHLWVEGQREELE
VLAATLGLEERDPERG
>Mature_176_residues
MQGETISTLLLTVLLAIGLFFFLRASGKDRVEARLYFSSRNLEEMGSLLRKHLEGRAYRLQSADPEGIATFVGQARASVG
LAVFLTGLAGAGLACLALVLQMLQPAWGAWPWTLLLASPWAGWYYWRRSHRPQQIRLKLQEAAPPPGSHLWVEGQREELE
VLAATLGLEERDPERG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19582; Mature: 19582

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGETISTLLLTVLLAIGLFFFLRASGKDRVEARLYFSSRNLEEMGSLLRKHLEGRAYRL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEE
QSADPEGIATFVGQARASVGLAVFLTGLAGAGLACLALVLQMLQPAWGAWPWTLLLASPW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
AGWYYWRRSHRPQQIRLKLQEAAPPPGSHLWVEGQREELEVLAATLGLEERDPERG
HHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQGETISTLLLTVLLAIGLFFFLRASGKDRVEARLYFSSRNLEEMGSLLRKHLEGRAYRL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEE
QSADPEGIATFVGQARASVGLAVFLTGLAGAGLACLALVLQMLQPAWGAWPWTLLLASPW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
AGWYYWRRSHRPQQIRLKLQEAAPPPGSHLWVEGQREELEVLAATLGLEERDPERG
HHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA